#include <OpalData.h>

Inherits enable_shared_from_this< PartBunchBase< T, Dim > >.

Collaboration diagram for PartBunchBase< T, Dim >:

Classes
class	ConstIterator

Public Types
enum	UnitState_t { units = 0, unitless = 1 }

typedef AbstractParticle< T, Dim >::ParticlePos_t	ParticlePos_t

typedef AbstractParticle< T, Dim >::ParticleIndex_t	ParticleIndex_t

typedef AbstractParticle< T, Dim >::UpdateFlags	UpdateFlags_t

typedef AbstractParticle< T, Dim >::Position_t	Position_t

typedef std::pair< Vector_t, Vector_t >	VectorPair_t

Public Member Functions
virtual	~PartBunchBase ()

	PartBunchBase (AbstractParticle< T, Dim > pb, const PartData ref)

	PartBunchBase (const PartBunchBase &rhs)=delete

virtual void	initialize (FieldLayout_t *fLayout)=0

bool	getIfBeamEmitting ()

int	getLastEmittedEnergyBin ()

size_t	getNumberOfEmissionSteps ()

int	getNumberOfEnergyBins ()

void	Rebin ()

void	setEnergyBins (int numberOfEnergyBins)

bool	weHaveEnergyBins ()

void	switchToUnitlessPositions (bool use_dt_per_particle=false)

void	switchOffUnitlessPositions (bool use_dt_per_particle=false)

void	setDistribution (Distribution d, std::vector< Distribution > addedDistributions, size_t &np)

void	setDistribution (Distribution *d, size_t numberOfParticles, double current, const Beamline &bl)

bool	isGridFixed () const

bool	hasBinning () const

void	setTEmission (double t)

double	getTEmission ()

bool	doEmission ()

bool	weHaveBins () const

void	setPBins (PartBins *pbin)

void	setPBins (PartBinsCyc *pbin)

size_t	emitParticles (double eZ)
	Emit particles in the given bin i.e. copy the particles from the bin structure into the particle container. More...

void	updateNumTotal ()

void	rebin ()

int	getLastemittedBin ()

void	setLocalBinCount (size_t num, int bin)

void	calcGammas ()
	Compute the gammas of all bins. More...

void	calcGammas_cycl ()

void	calcDebyeLength ()
	Compute the (global) Debye length for the beam. More...

double	getBinGamma (int bin)
	Get gamma of one bin. More...

virtual void	setBinCharge (int bin, double q)
	Set the charge of one bin to the value of q and all other to zero. More...

virtual void	setBinCharge (int bin)
	Set the charge of all other the ones in bin to zero. More...

size_t	calcNumPartsOutside (Vector_t x)
	returns the number of particles outside of a box defined by x More...

void	calcLineDensity (unsigned int nBins, std::vector< double > &lineDensity, std::pair< double, double > &meshInfo)
	calculates the 1d line density (not normalized) and append it to a file. More...

void	setBeamFrequency (double v)

virtual void	boundp ()

void	boundp_destroyCycl ()

size_t	boundp_destroyT ()

size_t	destroyT ()

virtual double	getPx (int i)

virtual double	getPy (int i)

virtual double	getPz (int i)

virtual double	getPx0 (int i)

virtual double	getPy0 (int i)

virtual double	getX (int i)

virtual double	getY (int i)

virtual double	getZ (int i)

virtual double	getX0 (int i)

virtual double	getY0 (int i)

virtual void	setZ (int i, double zcoo)

void	get_bounds (Vector_t &rmin, Vector_t &rmax) const

void	getLocalBounds (Vector_t &rmin, Vector_t &rmax) const

std::pair< Vector_t, double >	getBoundingSphere ()

std::pair< Vector_t, double >	getLocalBoundingSphere ()

void	push_back (OpalParticle const &p)

void	setParticle (FVector< double, 6 > z, int ii)

void	setParticle (OpalParticle const &p, int ii)

OpalParticle	getParticle (int ii)

ConstIterator	begin () const

ConstIterator	end () const

void	maximumAmplitudes (const FMatrix< double, 6, 6 > &D, double &axmax, double &aymax)
	Return maximum amplitudes. More...

void	setdT (double dt)

double	getdT () const

void	setT (double t)

void	incrementT ()

double	getT () const

double	get_sPos () const

void	set_sPos (double s)

double	get_gamma () const

double	get_meanKineticEnergy () const

double	get_temperature () const

double	get_debyeLength () const

double	get_plasmaParameter () const

double	get_rmsDensity () const

Vector_t	get_origin () const

Vector_t	get_maxExtent () const

Vector_t	get_centroid () const

Vector_t	get_rrms () const

Vector_t	get_rprms () const

Vector_t	get_rmean () const

Vector_t	get_prms () const

Vector_t	get_pmean () const

Vector_t	get_pmean_Distribution () const

Vector_t	get_emit () const

Vector_t	get_norm_emit () const

Vector_t	get_halo () const

Vector_t	get_68Percentile () const

Vector_t	get_95Percentile () const

Vector_t	get_99Percentile () const

Vector_t	get_99_99Percentile () const

Vector_t	get_normalizedEps_68Percentile () const

Vector_t	get_normalizedEps_95Percentile () const

Vector_t	get_normalizedEps_99Percentile () const

Vector_t	get_normalizedEps_99_99Percentile () const

virtual Vector_t	get_hr () const

double	get_Dx () const

double	get_Dy () const

double	get_DDx () const

double	get_DDy () const

virtual void	set_meshEnlargement (double dh)

void	gatherLoadBalanceStatistics ()

size_t	getLoadBalance (int p) const

void	get_PBounds (Vector_t &min, Vector_t &max) const

void	calcBeamParameters ()

void	calcBeamParametersInitial ()

double	getCouplingConstant () const

void	setCouplingConstant (double c)

void	setCharge (double q)

void	setChargeZeroPart (double q)

void	setMass (double mass)

void	setMassZeroPart (double mass)

double	getCharge () const
	get the total charge per simulation particle More...

double	getChargePerParticle () const
	get the macro particle charge More...

double	getMassPerParticle () const

virtual void	setSolver (FieldSolver *fs)

bool	hasFieldSolver ()

FieldSolverType	getFieldSolverType () const
	Return the fieldsolver type if we have a fieldsolver. More...

void	setStepsPerTurn (int n)

int	getStepsPerTurn () const

void	setGlobalTrackStep (long long n)
	step in multiple TRACK commands More...

long long	getGlobalTrackStep () const

void	setLocalTrackStep (long long n)
	step in a TRACK command More...

void	incTrackSteps ()

long long	getLocalTrackStep () const

void	setNumBunch (short n)

short	getNumBunch () const

void	setTotalNumPerBunch (size_t numpart, short n)

size_t	getTotalNumPerBunch (short n) const

void	setLocalNumPerBunch (size_t numpart, short n)

size_t	getLocalNumPerBunch (short n) const

void	countTotalNumPerBunch ()

void	setGlobalMeanR (Vector_t globalMeanR)

Vector_t	getGlobalMeanR ()

void	setGlobalToLocalQuaternion (Quaternion_t globalToLocalQuaternion)

Quaternion_t	getGlobalToLocalQuaternion ()

void	setSteptoLastInj (int n)

int	getSteptoLastInj () const

double	calcMeanPhi ()
	calculate average angle of longitudinal direction of bins More...

bool	resetPartBinID2 (const double eta)
	reset Bin[] for each particle according to the method given in paper PAST-AB(064402) by G. Fubiani et al. More...

bool	resetPartBinBunch ()

double	getdE () const

virtual double	getGamma (int i)

virtual double	getBeta (int i)

virtual void	actT ()

const PartData *	getReference () const

double	getEmissionDeltaT ()

DistributionType	getDistType () const

double	getMomentumTolerance () const

Quaternion_t	getQKs3D ()

void	setQKs3D (Quaternion_t q)

Vector_t	getKs3DRefr ()

void	setKs3DRefr (Vector_t r)

Vector_t	getKs3DRefp ()

void	setKs3DRefp (Vector_t p)

void	iterateEmittedBin (int binNumber)

void	calcEMean ()

Inform &	print (Inform &os)

virtual void	runTests ()

virtual void	do_binaryRepart ()

virtual void	resetInterpolationCache (bool clearCache=false)

virtual VectorPair_t	getEExtrema ()=0

virtual double	getRho (int x, int y, int z)=0

virtual void	computeSelfFields ()=0

virtual void	computeSelfFields (int bin)=0

virtual void	computeSelfFields_cycl (double gamma)=0

virtual void	computeSelfFields_cycl (int bin)=0

virtual void	swap (unsigned int i, unsigned int j)

virtual void	setBCAllPeriodic ()

virtual void	setBCAllOpen ()

virtual void	setBCForDCBeam ()

virtual FieldLayout_t &	getFieldLayout ()=0

virtual void	resizeMesh ()

size_t	getTotalNum () const

void	setTotalNum (size_t n)

void	setLocalNum (size_t n)

size_t	getLocalNum () const

size_t	getDestroyNum () const

size_t	getGhostNum () const

ParticleLayout< T, Dim > &	getLayout ()

const ParticleLayout< T, Dim > &	getLayout () const

bool	getUpdateFlag (UpdateFlags_t f) const

void	setUpdateFlag (UpdateFlags_t f, bool val)

ParticleBConds< Position_t, Dimension > &	getBConds ()

void	setBConds (const ParticleBConds< Position_t, Dimension > &bc)

bool	singleInitNode () const

void	resetID ()

void	update ()

void	update (const ParticleAttrib< char > &canSwap)

void	createWithID (unsigned id)

void	create (size_t M)

void	globalCreate (size_t np)

void	destroy (size_t M, size_t I, bool doNow=false)

void	performDestroy (bool updateLocalNum=false)

void	ghostDestroy (size_t M, size_t I)

FMatrix< double, 2 Dim, 2 Dim >	getSigmaMatrix () const


double	getQ () const
	Access to reference data. More...

double	getM () const

double	getP () const

double	getE () const

ParticleOrigin	getPOrigin () const

ParticleType	getPType () const

double	getInitialBeta () const

double	getInitialGamma () const


void	resetQ (double q)

void	resetM (double m)

void	setPOrigin (ParticleOrigin)

void	setPType (const std::string &type)

Public Attributes
ParticlePos_t &	R

ParticleIndex_t &	ID

ParticleAttrib< Vector_t >	P

ParticleAttrib< double >	Q

ParticleAttrib< double >	M

ParticleAttrib< double >	Phi

ParticleAttrib< Vector_t >	Ef

ParticleAttrib< Vector_t >	Eftmp

ParticleAttrib< Vector_t >	Bf

ParticleAttrib< int >	Bin

ParticleAttrib< double >	dt

ParticleAttrib< ParticleType >	PType

ParticleAttrib< ParticleOrigin >	POrigin

ParticleAttrib< int >	TriID

ParticleAttrib< short >	cavityGapCrossed

ParticleAttrib< short >	bunchNum

Vector_t	RefPartR_m

Vector_t	RefPartP_m

CoordinateSystemTrafo	toLabTrafo_m

ParticleOrigin	refPOrigin_m

ParticleType	refPType_m

PartBins *	pbin_m

IpplTimings::TimerRef	distrReload_m
	timer for IC, can not be in Distribution.h More...

IpplTimings::TimerRef	distrCreate_m

double	dtScInit_m

double	deltaTau_m

Static Public Attributes
static const unsigned	Dimension = Dim

Protected Member Functions
size_t	calcMoments ()

void	calcMomentsInitial ()

double	calculateAngle (double x, double y)
	angle range [0~2PI) degree More...

Protected Attributes
IpplTimings::TimerRef	boundpTimer_m

IpplTimings::TimerRef	boundpBoundsTimer_m

IpplTimings::TimerRef	boundpUpdateTimer_m

IpplTimings::TimerRef	statParamTimer_m

IpplTimings::TimerRef	histoTimer_m

IpplTimings::TimerRef	selfFieldTimer_m
	timer for selfField calculation More...

const PartData *	reference

UnitState_t	unit_state_

UnitState_t	stateOfLastBoundP_

double	centroid_m [2 *Dim]
	holds the centroid of the beam More...

double	dt_m
	holds the timestep in seconds More...

double	t_m
	holds the actual time of the integration More...

double	spos_m
	the position along design trajectory More...

Vector_t	globalMeanR_m

Quaternion_t	globalToLocalQuaternion_m

Vector_t	rmax_m
	maximal extend of particles More...

Vector_t	rmin_m
	minimal extend of particles More...

double	rmsDensity_m

Vector_t	hr_m
	meshspacing of cartesian mesh More...

Vektor< int, 3 >	nr_m
	meshsize of cartesian mesh More...

FieldSolver *	fs_m
	stores the used field solver More...

double	couplingConstant_m

double	qi_m

double	massPerParticle_m

int	distDump_m
	counter to store the distribution dump More...

double	dh_m
	Mesh enlargement. More...

double	tEmission_m
	relative enlargement of the mesh More...

std::unique_ptr< double[]>	bingamma_m
	holds the gamma of the bin More...

std::unique_ptr< size_t[]>	binemitted_m

int	stepsPerTurn_m
	steps per turn for OPAL-cycl More...

long long	localTrackStep_m
	step in a TRACK command More...

long long	globalTrackStep_m
	if multiple TRACK commands More...

short	numBunch_m
	current bunch number More...

std::vector< size_t >	bunchTotalNum_m
	number of particles per bunch More...

std::vector< size_t >	bunchLocalNum_m

int	SteptoLastInj_m

std::unique_ptr< size_t[]>	globalPartPerNode_m

Distribution *	dist_m

DistributionMoments	momentsComputer_m

bool	dcBeam_m

double	periodLength_m

std::shared_ptr < AbstractParticle< T, Dim > >	pbase_m

Private Member Functions
virtual void	updateDomainLength (Vektor< int, 3 > &grid)=0

virtual void	updateFields (const Vector_t &hr, const Vector_t &origin)

void	setup (AbstractParticle< T, Dim > *pb)

Private Attributes
std::unique_ptr< Inform >	pmsg_m

std::unique_ptr< std::ofstream >	f_stream

bool	fixed_grid
	if the grid does not have to adapt More...

Detailed Description

template<class T = double, unsigned Dim = 3>
class PartBunchBase< T, Dim >

H5PartWrapper: a class that manages calls to H5Part

Definition at line 34 of file OpalData.h.

Member Typedef Documentation

template<class T = double, unsigned Dim = 3>

typedef AbstractParticle<T, Dim>::ParticleIndex_t PartBunchBase< T, Dim >::ParticleIndex_t

Definition at line 53 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

typedef AbstractParticle<T, Dim>::ParticlePos_t PartBunchBase< T, Dim >::ParticlePos_t

Definition at line 52 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

typedef AbstractParticle<T, Dim>::Position_t PartBunchBase< T, Dim >::Position_t

Definition at line 55 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

typedef AbstractParticle<T, Dim>::UpdateFlags PartBunchBase< T, Dim >::UpdateFlags_t

Definition at line 54 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

typedef std::pair<Vector_t, Vector_t> PartBunchBase< T, Dim >::VectorPair_t

Definition at line 57 of file PartBunchBase.h.

Member Enumeration Documentation

template<class T = double, unsigned Dim = 3>

enum PartBunchBase::UnitState_t

Enumerator
units
unitless

Definition at line 61 of file PartBunchBase.h.

Constructor & Destructor Documentation

template<class T = double, unsigned Dim = 3>

virtual PartBunchBase< T, Dim >::~PartBunchBase ( )

inlinevirtual

Definition at line 64 of file PartBunchBase.h.

template<class T, unsigned Dim>

PartBunchBase< T, Dim >::PartBunchBase	(	AbstractParticle< T, Dim > *	pb,
		const PartData *	ref
	)

Definition at line 41 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::setup().

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template<class T = double, unsigned Dim = 3>

PartBunchBase< T, Dim >::PartBunchBase ( const PartBunchBase< T, Dim > & rhs )

delete

Member Function Documentation

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::actT ( )

virtual

Definition at line 1730 of file PartBunchBase.hpp.

template<class T = double, unsigned Dim = 3>

ConstIterator PartBunchBase< T, Dim >::begin ( ) const

inline

Definition at line 279 of file PartBunchBase.h.

Referenced by begin(), and DistributionMoments::compute().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::boundp ( )

virtual

In case of dcBeam_m && hr_m < 0 this is the first call to boundp and we have to set hr completely i.e. x,y and z.

Reimplemented in AmrPartBunch.

Definition at line 510 of file PartBunchBase.hpp.

Referenced by PartBunchBase< T, Dim >::boundp_destroyT(), ParallelTTracker::computeParticleMatterInteraction(), ParallelTTracker::computeSpaceChargeFields(), ParallelCyclotronTracker::computeSpaceChargeFields_m(), ParallelCyclotronTracker::deleteParticle(), Distribution::doRestartOpalCycl(), Distribution::doRestartOpalT(), ParallelCyclotronTracker::initDistInGlobalFrame(), Distribution::injectBeam(), and MultiBunchHandler::readBunch().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::boundp_destroyCycl ( )

delete particles which are too far away from the center of beam

Definition at line 611 of file PartBunchBase.hpp.

Referenced by ParallelCyclotronTracker::computeSpaceChargeFields_m().

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template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::boundp_destroyT ( )

This is only temporary in order to get the collimator and pepperpot working

Definition at line 719 of file PartBunchBase.hpp.

Referenced by ParallelTTracker::computeExternalFields().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::calcBeamParameters ( )

Definition at line 1267 of file PartBunchBase.hpp.

References DistributionMoments::compute(), PartBunchBase< T, Dim >::get_bounds(), PartBunchBase< T, Dim >::momentsComputer_m, PartBunchBase< T, Dim >::rmax_m, PartBunchBase< T, Dim >::rmin_m, IpplTimings::startTimer(), PartBunchBase< T, Dim >::statParamTimer_m, and IpplTimings::stopTimer().

Referenced by Undulator::apply(), GreenWakeFunction::apply(), PartBunchBase< T, Dim >::boundp_destroyCycl(), PartBunchBase< T, Dim >::boundp_destroyT(), ParallelTTracker::computeSpaceChargeFields(), ParallelTTracker::computeWakefield(), ParallelCyclotronTracker::deleteParticle(), PartBunchBase< T, Dim >::destroyT(), DataSink::dumpSDDS(), ParallelCyclotronTracker::finalizeTracking_m(), ParallelCyclotronTracker::initDistInGlobalFrame(), MultiBunchHandler::injectBunch(), TrackRun::setupCyclotronTracker(), TrackRun::setupThickTracker(), TrackRun::setupTTracker(), ThickTracker::update_m(), ParallelTTracker::writePhaseSpace(), H5PartWrapperForPT::writeStep(), and H5PartWrapperForPC::writeStepHeader().

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template<class T = double, unsigned Dim = 3>

void PartBunchBase< T, Dim >::calcBeamParametersInitial ( )

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::calcDebyeLength ( )

Compute the (global) Debye length for the beam.

Definition at line 413 of file PartBunchBase.hpp.

References DistributionMoments::computeDebyeLength(), PartBunchBase< T, Dim >::momentsComputer_m, and PartBunchBase< T, Dim >::rmsDensity_m.

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::calcEMean ( )

Definition at line 1754 of file PartBunchBase.hpp.

References DistributionMoments::computeMeanKineticEnergy(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by ParallelTTracker::dumpStats(), Distribution::injectBeam(), and ThickTracker::update_m().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::calcGammas ( )

Compute the gammas of all bins.

Definition at line 339 of file PartBunchBase.hpp.

References abs(), PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::binemitted_m, PartBunchBase< T, Dim >::bingamma_m, PartBunchBase< T, Dim >::dist_m, dot(), endl(), ERRORMSG, OpalData::getInstance(), PartBunchBase< T, Dim >::getLocalNum(), Distribution::getNumberOfEnergyBins(), PartBunchBase< T, Dim >::getTotalNum(), INFOMSG, level2(), Hypervolume::n, PartBunchBase< T, Dim >::P, reduce(), and sqrt().

Referenced by ParallelTTracker::computeSpaceChargeFields().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::calcGammas_cycl ( )

Definition at line 386 of file PartBunchBase.hpp.

References allreduce(), PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::bingamma_m, dot(), endl(), PartBins::getLastemittedBin(), PartBunchBase< T, Dim >::getLocalNum(), PartBins::getTotalNumPerBin(), INFOMSG, Hypervolume::n, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::pbin_m, and sqrt().

Referenced by ParallelCyclotronTracker::computeSpaceChargeFields_m(), PartBunchBase< T, Dim >::resetPartBinBunch(), and PartBunchBase< T, Dim >::resetPartBinID2().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::calcLineDensity	(	unsigned int	nBins,
		std::vector< double > &	lineDensity,
		std::pair< double, double > &	meshInfo
	)

calculates the 1d line density (not normalized) and append it to a file.

calcLineDensity()

See Also: ParallelTTracker

Warning: none yet

DETAILED TODO

Definition at line 471 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dh_m, PartBunchBase< T, Dim >::get_bounds(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::Q, Attrib::Distribution::R, reduce(), and PartBunchBase< T, Dim >::updateDomainLength().

Referenced by GreenWakeFunction::apply(), CSRIGFWakeFunction::calculateLineDensity(), and CSRWakeFunction::calculateLineDensity().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::calcMeanPhi ( )

calculate average angle of longitudinal direction of bins

Definition at line 1518 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::calculateAngle(), endl(), PartBins::getLastemittedBin(), PartBunchBase< T, Dim >::getLocalNum(), INFOMSG, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::pbin_m, Units::rad2deg, and reduce().

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template<class T = double, unsigned Dim = 3>

size_t PartBunchBase< T, Dim >::calcMoments ( )

protected

template<class T = double, unsigned Dim = 3>

void PartBunchBase< T, Dim >::calcMomentsInitial ( )

protected

template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::calcNumPartsOutside ( Vector_t x )

returns the number of particles outside of a box defined by x

Definition at line 438 of file PartBunchBase.hpp.

References abs(), gather(), PartBunchBase< T, Dim >::get_rmean(), PartBunchBase< T, Dim >::getLocalNum(), IpplInfo::getNodes(), PartBunchBase< T, Dim >::globalPartPerNode_m, and Attrib::Distribution::R.

Referenced by DataSink::dumpSDDS().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::calculateAngle	(	double	x,
		double	y
	)

protected

angle range [0~2PI) degree

Definition at line 1797 of file PartBunchBase.hpp.

References atan2(), and Physics::two_pi.

Referenced by PartBunchBase< T, Dim >::calcMeanPhi().

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template<class T = double, unsigned Dim = 3>

virtual void PartBunchBase< T, Dim >::computeSelfFields ( )

pure virtual

Implemented in PartBunch, and AmrPartBunch.

Referenced by ParallelTTracker::computeSpaceChargeFields().

template<class T = double, unsigned Dim = 3>

virtual void PartBunchBase< T, Dim >::computeSelfFields ( int bin )

pure virtual

Implemented in PartBunch, and AmrPartBunch.

template<class T = double, unsigned Dim = 3>

virtual void PartBunchBase< T, Dim >::computeSelfFields_cycl ( double gamma )

pure virtual

Implemented in PartBunch, and AmrPartBunch.

Referenced by ParallelCyclotronTracker::computeSpaceChargeFields_m().

template<class T = double, unsigned Dim = 3>

virtual void PartBunchBase< T, Dim >::computeSelfFields_cycl ( int bin )

pure virtual

Implemented in PartBunch, and AmrPartBunch.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::countTotalNumPerBunch ( )

Definition at line 1455 of file PartBunchBase.hpp.

References allreduce(), PartBunchBase< T, Dim >::bunchLocalNum_m, PartBunchBase< T, Dim >::bunchNum, PartBunchBase< T, Dim >::bunchTotalNum_m, PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getTotalNum(), PartBunchBase< T, Dim >::numBunch_m, and PAssert_LT.

Referenced by PartBunchBase< T, Dim >::boundp_destroyCycl(), and ParallelCyclotronTracker::initDistInGlobalFrame().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::create ( size_t M )

Definition at line 1990 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

Referenced by Undulator::apply(), Stripper::doCheck(), Distribution::doRestartOpalCycl(), Distribution::doRestartOpalT(), Distribution::emitParticles(), ParallelTTracker::evenlyDistributeParticles(), Distribution::injectBeam(), PartBunchBase< T, Dim >::push_back(), and MultiBunchHandler::readBunch().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::createWithID ( unsigned id )

Definition at line 1985 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

Referenced by ScatteringPhysics::addParticleBackToBunch().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::destroy	(	size_t	M,
		size_t	I,
		bool	doNow = `false`
	)

Definition at line 2000 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

Referenced by Undulator::apply(), PartBunchBase< T, Dim >::boundp_destroyCycl(), PartBunchBase< T, Dim >::boundp_destroyT(), ScatteringPhysics::copyFromBunch(), ParallelCyclotronTracker::deleteParticle(), PartBunchBase< T, Dim >::destroyT(), and ParallelTTracker::evenlyDistributeParticles().

template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::destroyT ( )

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::do_binaryRepart ( )

virtual

Reimplemented in AmrPartBunch, and PartBunch.

Definition at line 212 of file PartBunchBase.hpp.

Referenced by ParallelTTracker::doBinaryRepartition(), and ParallelCyclotronTracker::repartition().

template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::doEmission ( )

Definition at line 266 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, and Distribution::getIfDistEmitting().

Referenced by ParallelTTracker::prepareEmission().

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template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::emitParticles ( double eZ )

Emit particles in the given bin i.e. copy the particles from the bin structure into the particle container.

Definition at line 299 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, and Distribution::emitParticles().

Referenced by ParallelTTracker::emitParticles().

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template<class T = double, unsigned Dim = 3>

ConstIterator PartBunchBase< T, Dim >::end ( ) const

inline

Definition at line 283 of file PartBunchBase.h.

Referenced by DistributionMoments::compute(), and end().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::gatherLoadBalanceStatistics ( )

Definition at line 1244 of file PartBunchBase.hpp.

References gather(), PartBunchBase< T, Dim >::getLocalNum(), IpplInfo::getNodes(), and PartBunchBase< T, Dim >::globalPartPerNode_m.

Referenced by PartBunchBase< T, Dim >::boundp_destroyT(), PartBunchBase< T, Dim >::destroyT(), and DataSink::dumpSDDS().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_68Percentile ( ) const

Definition at line 1168 of file PartBunchBase.hpp.

References DistributionMoments::get68Percentile(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_95Percentile ( ) const

Definition at line 1173 of file PartBunchBase.hpp.

References DistributionMoments::get95Percentile(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_99_99Percentile ( ) const

Definition at line 1183 of file PartBunchBase.hpp.

References DistributionMoments::get99_99Percentile(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_99Percentile ( ) const

Definition at line 1178 of file PartBunchBase.hpp.

References DistributionMoments::get99Percentile(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::get_bounds	(	Vector_t &	rmin,
		Vector_t &	rmax
	)		const

template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_centroid ( ) const

Definition at line 1105 of file PartBunchBase.hpp.

References DistributionMoments::getMeanPosition(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by Undulator::apply(), Ring::apply(), ParallelTTracker::computeSpaceChargeFields(), MultiBunchHandler::injectBunch(), H5PartWrapperForPC::writeStepHeader(), and H5PartWrapperForPT::writeStepHeader().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_DDx ( ) const

Definition at line 1220 of file PartBunchBase.hpp.

References DistributionMoments::getDDx(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_DDy ( ) const

Definition at line 1226 of file PartBunchBase.hpp.

References DistributionMoments::getDDy(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_debyeLength ( ) const

Definition at line 1078 of file PartBunchBase.hpp.

References DistributionMoments::getDebyeLength(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_Dx ( ) const

Definition at line 1208 of file PartBunchBase.hpp.

References DistributionMoments::getDx(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_Dy ( ) const

Definition at line 1214 of file PartBunchBase.hpp.

References DistributionMoments::getDy(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_emit ( ) const

Definition at line 1151 of file PartBunchBase.hpp.

References DistributionMoments::getGeometricEmittance(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by PartBunchBase< T, Dim >::print(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_gamma ( ) const

Definition at line 1061 of file PartBunchBase.hpp.

References DistributionMoments::getMeanGamma(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by Undulator::apply(), ThickTracker::update_m(), H5PartWrapperForPC::writeStepHeader(), and H5PartWrapperForPT::writeStepHeader().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_halo ( ) const

Definition at line 1163 of file PartBunchBase.hpp.

References DistributionMoments::getHalo(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_hr ( ) const

virtual

Reimplemented in AmrPartBunch.

Definition at line 1232 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::hr_m.

Referenced by MGPoissonSolver::MGPoissonSolver(), PartBunchBase< T, Dim >::print(), H5PartWrapperForPC::writeStepData(), and H5PartWrapperForPT::writeStepData().

template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_maxExtent ( ) const

Definition at line 1099 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::rmax_m.

Referenced by Undulator::apply(), StatWriter::write(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_meanKineticEnergy ( ) const

Definition at line 1067 of file PartBunchBase.hpp.

References DistributionMoments::getMeanKineticEnergy(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by ParallelCyclotronTracker::bunchDumpPhaseSpaceData(), CSRIGFWakeFunction::calculateGreenFunction(), ParallelTTracker::dumpStats(), Expressions::getEkin(), PartBunchBase< T, Dim >::print(), StatWriter::write(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_norm_emit ( ) const

Definition at line 1157 of file PartBunchBase.hpp.

References DistributionMoments::getNormalizedEmittance(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write(), H5PartWrapperForPC::writeStepHeader(), and H5PartWrapperForPT::writeStepHeader().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_normalizedEps_68Percentile ( ) const

Definition at line 1188 of file PartBunchBase.hpp.

References DistributionMoments::getNormalizedEmittance68Percentile(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_normalizedEps_95Percentile ( ) const

Definition at line 1193 of file PartBunchBase.hpp.

References DistributionMoments::getNormalizedEmittance95Percentile(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_normalizedEps_99_99Percentile ( ) const

Definition at line 1203 of file PartBunchBase.hpp.

References DistributionMoments::getNormalizedEmittance99_99Percentile(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_normalizedEps_99Percentile ( ) const

Definition at line 1198 of file PartBunchBase.hpp.

References DistributionMoments::getNormalizedEmittance99Percentile(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_origin ( ) const

Definition at line 1093 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::rmin_m.

Referenced by H5PartWrapperForPC::writeStepData(), H5PartWrapperForPT::writeStepData(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::get_PBounds	(	Vector_t &	min,
		Vector_t &	max
	)		const

Definition at line 1261 of file PartBunchBase.hpp.

References bounds(), and PartBunchBase< T, Dim >::P.

Referenced by H5PartWrapperForPC::writeStepHeader(), and H5PartWrapperForPT::writeStepHeader().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_plasmaParameter ( ) const

Definition at line 1083 of file PartBunchBase.hpp.

References DistributionMoments::getPlasmaParameter(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_pmean ( ) const

Definition at line 1135 of file PartBunchBase.hpp.

References DistributionMoments::getMeanMomentum(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by Undulator::apply(), ParallelTTracker::computeSpaceChargeFields(), ParallelTTracker::computeWakefield(), PartBunchBase< T, Dim >::getSigmaMatrix(), PartBunchBase< T, Dim >::print(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_pmean_Distribution ( ) const

Definition at line 1141 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, Distribution::get_pmean(), PartBunchBase< T, Dim >::getM(), pow(), and sqrt().

Referenced by ParallelTTracker::execute(), and ThickTracker::execute().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_prms ( ) const

Definition at line 1129 of file PartBunchBase.hpp.

References DistributionMoments::getStandardDeviationMomentum(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by PartBunchBase< T, Dim >::print(), StatWriter::write(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_rmean ( ) const

Definition at line 1123 of file PartBunchBase.hpp.

References DistributionMoments::getMeanPosition(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by PartBunchBase< T, Dim >::calcNumPartsOutside(), PartBunchBase< T, Dim >::getSigmaMatrix(), PartBunchBase< T, Dim >::print(), StatWriter::write(), and H5PartWrapperForPC::writeStepHeader().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_rmsDensity ( ) const

Definition at line 1088 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::rmsDensity_m.

Referenced by StatWriter::write().

template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_rprms ( ) const

Definition at line 1117 of file PartBunchBase.hpp.

References DistributionMoments::getStandardDeviationRP(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by PartBunchBase< T, Dim >::print(), and StatWriter::write().

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template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::get_rrms ( ) const

Definition at line 1111 of file PartBunchBase.hpp.

References DistributionMoments::getStandardDeviationPosition(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by DataSink::dumpSDDS(), MultiBunchHandler::injectBunch(), PartBunchBase< T, Dim >::print(), StatWriter::write(), H5PartWrapperForPC::writeStepHeader(), and H5PartWrapperForPT::writeStepHeader().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_sPos ( ) const

get the spos of the primary beam

Parameters

none

Definition at line 1049 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::spos_m.

Referenced by CSRIGFWakeFunction::apply(), CSRWakeFunction::apply(), BeamStrippingPhysics::apply(), Monitor::applyToReferenceParticle(), Distribution::doRestartOpalCycl(), ParallelTTracker::execute(), ParallelCyclotronTracker::initDistInGlobalFrame(), Monitor::initialise(), PartBunchBase< T, Dim >::print(), ParallelCyclotronTracker::saveInjectValues(), ThickTracker::update_m(), MemoryWriter::write(), StatWriter::write(), MemoryProfiler::write(), H5PartWrapperForPC::writeStepHeader(), and H5PartWrapperForPT::writeStepHeader().

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::get_temperature ( ) const

Definition at line 1073 of file PartBunchBase.hpp.

References DistributionMoments::getTemperature(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by StatWriter::write().

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template<class T = double, unsigned Dim = 3>

ParticleBConds<Position_t, Dimension>& PartBunchBase< T, Dim >::getBConds ( )

inline

Definition at line 527 of file PartBunchBase.h.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getBeta ( int i )

virtual

Definition at line 1724 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getBinGamma ( int bin )

Get gamma of one bin.

Definition at line 420 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::bingamma_m.

Referenced by AmrBoxLib::computeSelfFields_cycl().

template<class T , unsigned Dim>

std::pair< Vector_t, double > PartBunchBase< T, Dim >::getBoundingSphere ( )

Definition at line 918 of file PartBunchBase.hpp.

References dot(), PartBunchBase< T, Dim >::get_bounds(), and sqrt().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getCharge ( ) const

get the total charge per simulation particle

Definition at line 1317 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::Q, and sum().

Referenced by StatWriter::write(), DataSink::writeImpactStatistics(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getChargePerParticle ( ) const

get the macro particle charge

Definition at line 1323 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::qi_m.

Referenced by Undulator::apply(), GreenWakeFunction::apply(), ParallelCyclotronTracker::computeSpaceChargeFields_m(), Distribution::doRestartOpalCycl(), Distribution::emitParticles(), Distribution::injectBeam(), Multipole::isFocusing(), and DataSink::writeImpactStatistics().

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getCouplingConstant ( ) const

Definition at line 1276 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::couplingConstant_m.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getdE ( ) const

Definition at line 1700 of file PartBunchBase.hpp.

References DistributionMoments::getStdKineticEnergy(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by PartBunchBase< T, Dim >::print(), StatWriter::write(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

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template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::getDestroyNum ( ) const

Definition at line 1917 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

DistributionType PartBunchBase< T, Dim >::getDistType ( ) const

Definition at line 1676 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, and Distribution::getType().

Referenced by ParallelCyclotronTracker::initDistInGlobalFrame().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getdT ( ) const

Definition at line 1025 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dt_m.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getE ( ) const

Definition at line 1648 of file PartBunchBase.hpp.

References PartData::getE(), and PartBunchBase< T, Dim >::reference.

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template<class T = double, unsigned Dim = 3>

virtual VectorPair_t PartBunchBase< T, Dim >::getEExtrema ( )

pure virtual

Implemented in PartBunch, and AmrPartBunch.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getEmissionDeltaT ( )

Definition at line 1742 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, and Distribution::getEmissionDeltaT().

Referenced by ParallelTTracker::prepareEmission(), and ParallelTTracker::selectDT().

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template<class T = double, unsigned Dim = 3>

virtual FieldLayout_t& PartBunchBase< T, Dim >::getFieldLayout ( )

pure virtual

Implemented in PartBunch, and AmrPartBunch.

Referenced by H5PartWrapperForPC::writeStepData(), and H5PartWrapperForPT::writeStepData().

template<class T , unsigned Dim>

FieldSolverType PartBunchBase< T, Dim >::getFieldSolverType ( ) const

Return the fieldsolver type if we have a fieldsolver.

Definition at line 1361 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::fs_m, FieldSolver::getFieldSolverType(), and NONE.

Referenced by ParallelCyclotronTracker::computeSpaceChargeFields_m().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getGamma ( int i )

virtual

Definition at line 1718 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::getGhostNum ( ) const

Definition at line 1922 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

Referenced by P3MPoissonSolver::calculatePairForces().

template<class T , unsigned Dim>

Vector_t PartBunchBase< T, Dim >::getGlobalMeanR ( )

Definition at line 1487 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::globalMeanR_m.

template<class T , unsigned Dim>

Quaternion_t PartBunchBase< T, Dim >::getGlobalToLocalQuaternion ( )

Definition at line 1500 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::globalToLocalQuaternion_m.

template<class T , unsigned Dim>

long long PartBunchBase< T, Dim >::getGlobalTrackStep ( ) const

Definition at line 1389 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::globalTrackStep_m.

Referenced by Monitor::applyToReferenceParticle(), Distribution::doRestartOpalT(), ThickTracker::dump_m(), ParallelTTracker::dumpStats(), ParallelTTracker::execute(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::getIfBeamEmitting ( )

Definition at line 91 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, Distribution::getIfDistEmitting(), and reduce().

Referenced by PartBunchBase< T, Dim >::boundp(), ParallelTTracker::emitParticles(), and ParallelTTracker::selectDT().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getInitialBeta ( ) const

Definition at line 1706 of file PartBunchBase.hpp.

References PartData::getBeta(), and PartBunchBase< T, Dim >::reference.

Referenced by ThickTracker::advanceDispersion_m(), and ThickTracker::updateParticle_m().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getInitialGamma ( ) const

Definition at line 1712 of file PartBunchBase.hpp.

References PartData::getGamma(), and PartBunchBase< T, Dim >::reference.

Referenced by Distribution::createOpalCycl(), and ThickTracker::updateParticle_m().

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template<class T = double, unsigned Dim = 3>

Vector_t PartBunchBase< T, Dim >::getKs3DRefp ( )

template<class T = double, unsigned Dim = 3>

Vector_t PartBunchBase< T, Dim >::getKs3DRefr ( )

template<class T , unsigned Dim>

int PartBunchBase< T, Dim >::getLastemittedBin ( )

Definition at line 322 of file PartBunchBase.hpp.

References PartBins::getLastemittedBin(), and PartBunchBase< T, Dim >::pbin_m.

Referenced by ParallelCyclotronTracker::computeSpaceChargeFields_m(), and ParallelCyclotronTracker::deleteParticle().

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template<class T , unsigned Dim>

int PartBunchBase< T, Dim >::getLastEmittedEnergyBin ( )

Definition at line 105 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, Distribution::getLastEmittedEnergyBin(), and reduce().

Referenced by ParallelTTracker::computeSpaceChargeFields().

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template<class T , unsigned Dim>

ParticleLayout< T, Dim > & PartBunchBase< T, Dim >::getLayout ( )

Definition at line 1937 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

Referenced by PartBunchBase< T, Dim >::boundp(), AmrBoxLib::create(), AmrYtWriter::writeBunch(), and AmrYtWriter::writeParticles_m().

template<class T , unsigned Dim>

const ParticleLayout< T, Dim > & PartBunchBase< T, Dim >::getLayout ( ) const

Definition at line 1942 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::getLoadBalance ( int p ) const

Definition at line 1255 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::globalPartPerNode_m.

Referenced by LBalWriter::write().

template<class T , unsigned Dim>

std::pair< Vector_t, double > PartBunchBase< T, Dim >::getLocalBoundingSphere ( )

Definition at line 931 of file PartBunchBase.hpp.

References dot(), PartBunchBase< T, Dim >::getLocalBounds(), and sqrt().

Referenced by ParallelTTracker::computeParticleMatterInteraction().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::getLocalBounds	(	Vector_t &	rmin,
		Vector_t &	rmax
	)		const

Definition at line 897 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::getLocalNum(), and Attrib::Distribution::R.

Referenced by PartBunchBase< T, Dim >::get_bounds(), and PartBunchBase< T, Dim >::getLocalBoundingSphere().

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template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::getLocalNum ( ) const

Definition at line 1911 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::getLocalNumPerBunch ( short n ) const

Definition at line 1448 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::bunchLocalNum_m, Hypervolume::n, and PAssert_LT.

Referenced by ParallelCyclotronTracker::deleteParticle().

template<class T , unsigned Dim>

long long PartBunchBase< T, Dim >::getLocalTrackStep ( ) const

Definition at line 1407 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::localTrackStep_m.

Referenced by MGPoissonSolver::computeMap(), MGPoissonSolver::computePotential(), AmrBoxLib::computeSelfFields_cycl(), Distribution::doRestartOpalT(), ParallelCyclotronTracker::initializeTracking_m(), ParallelCyclotronTracker::initTrackOrbitFile(), H5PartWrapperForPC::writeStepHeader(), and H5PartWrapperForPT::writeStepHeader().

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getM ( ) const

Definition at line 1636 of file PartBunchBase.hpp.

References PartData::getM(), and PartBunchBase< T, Dim >::reference.

Referenced by ScatteringPhysics::apply(), Degrader::applyToReferenceParticle(), MultiBunchHandler::calcBunchBeamParameters(), BendBase::calcDesignRadius(), BendBase::calcFieldAmplitude(), BendBase::calcGamma(), CSRIGFWakeFunction::calculateGreenFunction(), Distribution::createOpalCycl(), Distribution::createOpalT(), Distribution::doRestartOpalCycl(), ParallelTTracker::execute(), ParallelCyclotronTracker::finalizeTracking_m(), ParallelTTracker::findStartPosition(), PartBunchBase< T, Dim >::get_pmean_Distribution(), Corrector::goOnline(), PartBunchBase< T, Dim >::ConstIterator::operator*(), H5PartWrapperForPC::readStepHeader(), ParallelCyclotronTracker::RFkick(), Corrector::setDesignEnergy(), Distribution::setupEmissionModelAstra(), Distribution::setupEmissionModelNone(), Distribution::setupParticleBins(), Vacuum::updateParticleAttributes(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

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template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getMassPerParticle ( ) const

Definition at line 1328 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::massPerParticle_m.

Referenced by Distribution::emitParticles(), and Distribution::injectBeam().

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getMomentumTolerance ( ) const

Definition at line 1682 of file PartBunchBase.hpp.

References PartData::getMomentumTolerance(), and PartBunchBase< T, Dim >::reference.

Referenced by ParallelCyclotronTracker::checkFileMomentum(), and Distribution::createOpalT().

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template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::getNumberOfEmissionSteps ( )

Definition at line 116 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, and Distribution::getNumberOfEmissionSteps().

Referenced by ParallelTTracker::prepareEmission().

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template<class T , unsigned Dim>

int PartBunchBase< T, Dim >::getNumberOfEnergyBins ( )

Definition at line 122 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, and Distribution::getNumberOfEnergyBins().

Referenced by PartBunchBase< T, Dim >::boundp_destroyT(), ParallelTTracker::computeSpaceChargeFields(), PartBunchBase< T, Dim >::destroyT(), and ParallelTTracker::prepareEmission().

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template<class T , unsigned Dim>

short PartBunchBase< T, Dim >::getNumBunch ( ) const

Definition at line 1421 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::numBunch_m.

Referenced by MultiBunchHandler::calcBunchBeamParameters(), ParallelCyclotronTracker::deleteParticle(), Distribution::doRestartOpalCycl(), ParallelCyclotronTracker::execute(), AmrBoxLib::initFineLevels(), ParallelCyclotronTracker::initializeTracking_m(), MultiBunchHandler::MultiBunchHandler(), H5PartWrapperForPC::readStepData(), and H5PartWrapperForPC::writeStepHeader().

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getP ( ) const

Definition at line 1642 of file PartBunchBase.hpp.

References PartData::getP(), and PartBunchBase< T, Dim >::reference.

Referenced by Distribution::createOpalT(), and Distribution::setupParticleBins().

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template<class T , unsigned Dim>

OpalParticle PartBunchBase< T, Dim >::getParticle ( int ii )

Definition at line 977 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::ID, PartBunchBase< T, Dim >::M, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::Q, and Attrib::Distribution::R.

Referenced by Tracker::applyDrift(), Tracker::applyTransform(), and PartBunchBase< T, Dim >::maximumAmplitudes().

template<class T , unsigned Dim>

ParticleOrigin PartBunchBase< T, Dim >::getPOrigin ( ) const

Definition at line 1654 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::refPOrigin_m.

Referenced by Stripper::doFinaliseCheck().

template<class T , unsigned Dim>

ParticleType PartBunchBase< T, Dim >::getPType ( ) const

Definition at line 1665 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::refPType_m.

Referenced by BeamStrippingPhysics::apply(), ScatteringPhysics::apply(), ScatteringPhysics::computeEnergyLoss(), Distribution::emitParticles(), and Distribution::injectBeam().

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getPx ( int i )

virtual

Definition at line 815 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getPx0 ( int i )

virtual

Definition at line 830 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getPy ( int i )

virtual

Definition at line 820 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getPy0 ( int i )

virtual

Definition at line 835 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getPz ( int i )

virtual

Definition at line 825 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getQ ( ) const

Access to reference data.

Definition at line 1630 of file PartBunchBase.hpp.

References PartData::getQ(), and PartBunchBase< T, Dim >::reference.

Referenced by ScatteringPhysics::apply(), Degrader::applyToReferenceParticle(), BendBase::calcDesignRadius(), BendBase::calcFieldAmplitude(), Distribution::createOpalCycl(), Distribution::createOpalT(), Distribution::emitParticles(), RBend::findChordLength(), Bend2D::findIdealBendParameters(), Corrector::goOnline(), RBend3D::initialise(), RFCavity::initialise(), ParallelCyclotronTracker::RFkick(), Corrector::setDesignEnergy(), Vacuum::updateParticleAttributes(), H5PartWrapperForPC::writeStepHeader(), and H5PartWrapperForPT::writeStepHeader().

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template<class T = double, unsigned Dim = 3>

Quaternion_t PartBunchBase< T, Dim >::getQKs3D ( )

template<class T , unsigned Dim>

const PartData * PartBunchBase< T, Dim >::getReference ( ) const

Definition at line 1736 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::reference.

Referenced by Bend2D::setupPusher(), RFCavity::trackOnAxisParticle(), and RBend3D::trackRefParticleThrough().

template<class T = double, unsigned Dim = 3>

virtual double PartBunchBase< T, Dim >::getRho	(	int	x,
		int	y,
		int	z
	)

pure virtual

Implemented in AmrPartBunch, and PartBunch.

Referenced by H5PartWrapperForPC::writeStepData(), and H5PartWrapperForPT::writeStepData().

template<class T , unsigned Dim>

FMatrix< double, 2 *Dim, 2 *Dim > PartBunchBase< T, Dim >::getSigmaMatrix ( ) const

Definition at line 2020 of file PartBunchBase.hpp.

References Dim, PartBunchBase< T, Dim >::get_pmean(), PartBunchBase< T, Dim >::get_rmean(), DistributionMoments::getMoments6x6(), and PartBunchBase< T, Dim >::momentsComputer_m.

Referenced by ThickTracker::track_m(), and StatWriter::write().

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template<class T , unsigned Dim>

int PartBunchBase< T, Dim >::getStepsPerTurn ( ) const

Definition at line 1377 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::stepsPerTurn_m.

Referenced by ParallelCyclotronTracker::initializeTracking_m().

template<class T , unsigned Dim>

int PartBunchBase< T, Dim >::getSteptoLastInj ( ) const

Definition at line 1512 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::SteptoLastInj_m.

Referenced by Distribution::doRestartOpalCycl(), and H5PartWrapperForPC::writeStepHeader().

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getT ( ) const

Definition at line 1043 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::t_m.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getTEmission ( )

Definition at line 260 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::tEmission_m.

Referenced by ParallelTTracker::prepareEmission().

template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::getTotalNum ( ) const

Definition at line 1906 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

size_t PartBunchBase< T, Dim >::getTotalNumPerBunch ( short n ) const

Definition at line 1434 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::bunchTotalNum_m, Hypervolume::n, and PAssert_LT.

Referenced by ParallelCyclotronTracker::calcMeanR(), and ParallelCyclotronTracker::computePathLengthUpdate().

template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::getUpdateFlag ( UpdateFlags_t f ) const

Definition at line 1947 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getX ( int i )

virtual

Definition at line 841 of file PartBunchBase.hpp.

References Attrib::Distribution::R.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getX0 ( int i )

virtual

Definition at line 859 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getY ( int i )

virtual

Definition at line 847 of file PartBunchBase.hpp.

References Attrib::Distribution::R.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getY0 ( int i )

virtual

Definition at line 865 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

double PartBunchBase< T, Dim >::getZ ( int i )

virtual

Definition at line 853 of file PartBunchBase.hpp.

References Attrib::Distribution::R.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::ghostDestroy	(	size_t	M,
		size_t	I
	)

Definition at line 2010 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::globalCreate ( size_t np )

Definition at line 1995 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::hasBinning ( ) const

Definition at line 248 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbin_m.

Referenced by H5PartWrapperForPC::writeStepData().

template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::hasFieldSolver ( )

Definition at line 1351 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::fs_m, and FieldSolver::hasValidSolver().

Referenced by ParallelCyclotronTracker::bunchMode_m(), ParallelTTracker::computeExternalFields(), ParallelTTracker::computeParticleMatterInteraction(), AmrBoxLib::computeSelfFields_cycl(), ParallelTTracker::computeWakefield(), ParallelTTracker::doBinaryRepartition(), ParallelTTracker::evenlyDistributeParticles(), ParallelCyclotronTracker::getFieldsAtPoint(), and ParallelCyclotronTracker::MtsTracker().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::incrementT ( )

Definition at line 1037 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dt_m, and PartBunchBase< T, Dim >::t_m.

Referenced by ParallelTTracker::computeParticleMatterInteraction(), and ParallelTTracker::execute().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::incTrackSteps ( )

Definition at line 1401 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::globalTrackStep_m, and PartBunchBase< T, Dim >::localTrackStep_m.

Referenced by ParallelTTracker::execute().

template<class T = double, unsigned Dim = 3>

virtual void PartBunchBase< T, Dim >::initialize ( FieldLayout_t * fLayout )

pure virtual

Implemented in PartBunch, and AmrPartBunch.

Referenced by PartBunchBase< T, Dim >::setSolver().

template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::isGridFixed ( ) const

Definition at line 242 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::fixed_grid.

Referenced by PartBunchBase< T, Dim >::boundp().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::iterateEmittedBin ( int binNumber )

Definition at line 1748 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::binemitted_m.

Referenced by Distribution::emitParticles(), and Distribution::injectBeam().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::maximumAmplitudes	(	const FMatrix< double, 6, 6 > &	D,
		double &	axmax,
		double &	aymax
	)

Return maximum amplitudes.

Definition at line 986 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getParticle(), OpalParticle::getPx(), OpalParticle::getPy(), OpalParticle::getPz(), OpalParticle::getX(), OpalParticle::getY(), OpalParticle::getZ(), max(), pow(), and test::result.

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::performDestroy ( bool updateLocalNum = false )

Definition at line 2005 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

Referenced by ScatteringPhysics::copyFromBunch(), ParallelCyclotronTracker::deleteParticle(), and PartBunchBase< T, Dim >::destroyT().

template<class T , unsigned Dim>

Inform & PartBunchBase< T, Dim >::print ( Inform & os )

Definition at line 1759 of file PartBunchBase.hpp.

Referenced by Undulator::apply(), and PartBunch::print().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::push_back ( OpalParticle const & p )

Definition at line 944 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::create(), endl(), PartBunchBase< T, Dim >::getLocalNum(), OpalParticle::getP(), OpalParticle::getR(), PartBunchBase< T, Dim >::P, Attrib::Distribution::R, and PyOpal::PyOpalObjectNS::update().

Referenced by Tracker::addToBunch().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::Rebin ( )

Definition at line 128 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::dist_m, endl(), Distribution::getIfDistEmitting(), Distribution::Rebin(), and reduce().

Referenced by ParallelTTracker::emitParticles().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::rebin ( )

Definition at line 313 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::pbin_m, and PartBins::resetBins().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::resetID ( )

Definition at line 1962 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::resetInterpolationCache ( bool clearCache = false )

virtual

Reimplemented in PartBunch.

Definition at line 1821 of file PartBunchBase.hpp.

Referenced by ParallelTTracker::computeSpaceChargeFields(), and ParallelTTracker::emitParticles().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::resetM ( double m )

Definition at line 1694 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::reference.

Referenced by Stripper::doFinaliseCheck().

template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::resetPartBinBunch ( )

Definition at line 1608 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::calcGammas_cycl(), PartBunchBase< T, Dim >::getLocalNum(), PartBins::getNBins(), PartBunchBase< T, Dim >::numBunch_m, PartBunchBase< T, Dim >::pbin_m, and PartBins::resetPartInBin_cyc().

Referenced by MultiBunchHandler::updateParticleBins().

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template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::resetPartBinID2 ( const double eta )

reset Bin[] for each particle according to the method given in paper PAST-AB(064402) by G. Fubiani et al.

Definition at line 1557 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::calcGammas_cycl(), endl(), ERRORMSG, floor(), PartBunchBase< T, Dim >::getLocalNum(), PartBins::getNBins(), INFOMSG, Hypervolume::n, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::pbin_m, pow(), reduce(), PartBins::resetPartInBin_cyc(), and sqrt().

Referenced by MultiBunchHandler::updateParticleBins().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::resetQ ( double q )

Set reference data

Definition at line 1688 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::reference.

Referenced by Stripper::doFinaliseCheck().

template<class T = double, unsigned Dim = 3>

virtual void PartBunchBase< T, Dim >::resizeMesh ( )

inlinevirtual

Reimplemented in PartBunch.

Definition at line 506 of file PartBunchBase.h.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::runTests ( )

virtual

Definition at line 1815 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::set_meshEnlargement ( double dh )

virtual

Reimplemented in AmrPartBunch.

Definition at line 1238 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dh_m.

Referenced by FieldSolver::initAmrObject_m(), FieldSolver::initSolver(), and AmrPartBunch::set_meshEnlargement().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::set_sPos ( double s )

Definition at line 1055 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::spos_m.

Referenced by ParallelTTracker::execute(), ThickTracker::execute(), H5PartWrapperForPT::readStepHeader(), H5PartWrapperForPC::readStepHeader(), ThickTracker::update_m(), ParallelCyclotronTracker::updatePathLength(), and ParallelTTracker::writePhaseSpace().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setBCAllOpen ( )

virtual

Reimplemented in AmrPartBunch, and PartBunch.

Definition at line 1854 of file PartBunchBase.hpp.

Referenced by TrackRun::setupFieldsolver().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setBCAllPeriodic ( )

virtual

Reimplemented in AmrPartBunch, and PartBunch.

Definition at line 1848 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setBCForDCBeam ( )

virtual

Reimplemented in AmrPartBunch, and PartBunch.

Definition at line 1860 of file PartBunchBase.hpp.

Referenced by TrackRun::setupFieldsolver().

template<class T = double, unsigned Dim = 3>

void PartBunchBase< T, Dim >::setBConds ( const ParticleBConds< Position_t, Dimension > & bc )

inline

Definition at line 531 of file PartBunchBase.h.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setBeamFrequency ( double v )

Definition at line 2015 of file PartBunchBase.hpp.

References Physics::c, and PartBunchBase< T, Dim >::periodLength_m.

Referenced by TrackRun::setupTTracker().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setBinCharge	(	int	bin,
		double	q
	)

virtual

Set the charge of one bin to the value of q and all other to zero.

Reimplemented in AmrPartBunch.

Definition at line 426 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::Bin, cmp_diff::eq(), PartBunchBase< T, Dim >::Q, and where().

Referenced by ParallelTTracker::computeSpaceChargeFields(), and ParallelCyclotronTracker::computeSpaceChargeFields_m().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setBinCharge ( int bin )

virtual

Set the charge of all other the ones in bin to zero.

Reimplemented in AmrPartBunch.

Definition at line 432 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::Bin, cmp_diff::eq(), PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::qi_m, and where().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setCharge ( double q )

Definition at line 1288 of file PartBunchBase.hpp.

References endl(), PartBunchBase< T, Dim >::getTotalNum(), PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::qi_m, and WARNMSG.

Referenced by TrackRun::setupCyclotronTracker(), TrackRun::setupThickTracker(), and TrackRun::setupTTracker().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setChargeZeroPart ( double q )

Definition at line 1298 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::qi_m.

Referenced by TrackRun::setupThickTracker(), and TrackRun::setupTTracker().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setCouplingConstant ( double c )

Definition at line 1282 of file PartBunchBase.hpp.

References Physics::c, and PartBunchBase< T, Dim >::couplingConstant_m.

Referenced by TrackRun::setupCyclotronTracker(), TrackRun::setupThickTracker(), and TrackRun::setupTTracker().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setDistribution	(	Distribution *	d,
		std::vector< Distribution * >	addedDistributions,
		size_t &	np
	)

Definition at line 218 of file PartBunchBase.hpp.

References Distribution::createOpalT(), and PartBunchBase< T, Dim >::dist_m.

Referenced by TrackRun::setDistributionParallelT(), and TrackRun::setupCyclotronTracker().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setDistribution	(	Distribution *	d,
		size_t	numberOfParticles,
		double	current,
		const Beamline &	bl
	)

Definition at line 232 of file PartBunchBase.hpp.

References Distribution::createOpalCycl(), and PartBunchBase< T, Dim >::dist_m.

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setdT ( double dt )

Definition at line 1019 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dt, and PartBunchBase< T, Dim >::dt_m.

Referenced by ParallelTTracker::computeParticleMatterInteraction(), ParallelTTracker::execute(), ParallelTTracker::selectDT(), TrackRun::setupCyclotronTracker(), TrackRun::setupThickTracker(), TrackRun::setupTTracker(), and ThickTracker::update_m().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setEnergyBins ( int numberOfEnergyBins )

Definition at line 145 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::binemitted_m, and PartBunchBase< T, Dim >::bingamma_m.

Referenced by Distribution::initializeBeam(), and PartBunchBase< T, Dim >::setPBins().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setGlobalMeanR ( Vector_t globalMeanR )

Definition at line 1481 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::globalMeanR_m.

Referenced by ParallelTTracker::computeSpaceChargeFields(), and ParallelCyclotronTracker::computeSpaceChargeFields_m().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setGlobalToLocalQuaternion ( Quaternion_t globalToLocalQuaternion )

Definition at line 1493 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::globalToLocalQuaternion_m.

Referenced by ParallelCyclotronTracker::computeSpaceChargeFields_m().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setGlobalTrackStep ( long long n )

step in multiple TRACK commands

Definition at line 1383 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::globalTrackStep_m, and Hypervolume::n.

Referenced by H5PartWrapperForPC::readStepHeader(), H5PartWrapperForPT::readStepHeader(), and ThickTracker::update_m().

template<class T = double, unsigned Dim = 3>

void PartBunchBase< T, Dim >::setKs3DRefp ( Vector_t p )

template<class T = double, unsigned Dim = 3>

void PartBunchBase< T, Dim >::setKs3DRefr ( Vector_t r )

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setLocalBinCount	(	size_t	num,
		int	bin
	)

Definition at line 331 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbin_m, and PartBins::setPartNum().

Referenced by ParallelCyclotronTracker::deleteParticle().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setLocalNum ( size_t n )

Definition at line 1932 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setLocalNumPerBunch	(	size_t	numpart,
		short	n
	)

Definition at line 1441 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::bunchLocalNum_m, Hypervolume::n, and PAssert_LT.

Referenced by MultiBunchHandler::calcBunchBeamParameters(), ParallelCyclotronTracker::deleteParticle(), MultiBunchHandler::injectBunch(), and MultiBunchHandler::readBunch().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setLocalTrackStep ( long long n )

step in a TRACK command

Definition at line 1395 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::localTrackStep_m, and Hypervolume::n.

Referenced by H5PartWrapperForPC::readStepHeader(), H5PartWrapperForPT::readStepHeader(), TrackRun::setupThickTracker(), TrackRun::setupTTracker(), and ParallelCyclotronTracker::update_m().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setMass ( double mass )

Definition at line 1304 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::getTotalNum(), PartBunchBase< T, Dim >::M, and PartBunchBase< T, Dim >::massPerParticle_m.

Referenced by TrackRun::setupCyclotronTracker(), and TrackRun::setupTTracker().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setMassZeroPart ( double mass )

Definition at line 1311 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::massPerParticle_m.

Referenced by TrackRun::setupTTracker().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setNumBunch ( short n )

Definition at line 1413 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::bunchLocalNum_m, PartBunchBase< T, Dim >::bunchTotalNum_m, Hypervolume::n, and PartBunchBase< T, Dim >::numBunch_m.

Referenced by Distribution::initializeBeam(), MultiBunchHandler::injectBunch(), and H5PartWrapperForPC::readStepHeader().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setParticle	(	FVector< double, 6 >	z,
		int	ii
	)

Definition at line 959 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::P, and Attrib::Distribution::R.

Referenced by Tracker::applyDrift(), and Tracker::applyTransform().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setParticle	(	OpalParticle const &	p,
		int	ii
	)

Definition at line 970 of file PartBunchBase.hpp.

References OpalParticle::getP(), OpalParticle::getR(), PartBunchBase< T, Dim >::P, and Attrib::Distribution::R.

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setPBins ( PartBins * pbin )

Definition at line 284 of file PartBunchBase.hpp.

References endl(), PartBins::getNBins(), PartBunchBase< T, Dim >::pbin_m, and PartBunchBase< T, Dim >::setEnergyBins().

Referenced by Distribution::createOpalCycl(), Distribution::doRestartOpalCycl(), and MultiBunchHandler::MultiBunchHandler().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setPBins ( PartBinsCyc * pbin )

Definition at line 292 of file PartBunchBase.hpp.

References PartBins::getNBins(), PartBunchBase< T, Dim >::pbin_m, and PartBunchBase< T, Dim >::setEnergyBins().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setPOrigin ( ParticleOrigin origin )

Definition at line 1659 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::refPOrigin_m.

Referenced by Stripper::doCheck().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setPType ( const std::string & type )

Definition at line 1670 of file PartBunchBase.hpp.

References ParticleProperties::getParticleType(), and PartBunchBase< T, Dim >::refPType_m.

Referenced by TrackRun::setupCyclotronTracker(), and TrackRun::setupTTracker().

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template<class T = double, unsigned Dim = 3>

void PartBunchBase< T, Dim >::setQKs3D ( Quaternion_t q )

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setSolver ( FieldSolver * fs )

virtual

CAN not re-inizialize ParticleLayout this is an IPPL issue

Reimplemented in AmrPartBunch.

Definition at line 1333 of file PartBunchBase.hpp.

References Hypervolume::fs, PartBunchBase< T, Dim >::fs_m, FieldSolver::getFieldLayout(), OpalData::getInstance(), PartBunchBase< T, Dim >::initialize(), and FieldSolver::initSolver().

Referenced by AmrPartBunch::setSolver(), and TrackRun::setupFieldsolver().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setStepsPerTurn ( int n )

Definition at line 1371 of file PartBunchBase.hpp.

References Hypervolume::n, and PartBunchBase< T, Dim >::stepsPerTurn_m.

Referenced by TrackRun::setupCyclotronTracker().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setSteptoLastInj ( int n )

Definition at line 1506 of file PartBunchBase.hpp.

References Hypervolume::n, and PartBunchBase< T, Dim >::SteptoLastInj_m.

Referenced by H5PartWrapperForPC::readStepHeader().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setT ( double t )

Definition at line 1031 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::t_m.

Referenced by Undulator::apply(), ParallelTTracker::applyFractionalStep(), ParallelTTracker::computeParticleMatterInteraction(), ParallelTTracker::execute(), ParallelTTracker::findStartPosition(), H5PartWrapperForPC::readStepHeader(), H5PartWrapperForPT::readStepHeader(), TrackRun::setupThickTracker(), TrackRun::setupTTracker(), ThickTracker::update_m(), and ParallelCyclotronTracker::updateTime().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setTEmission ( double t )

Definition at line 254 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::tEmission_m.

Referenced by Distribution::initializeBeam().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setTotalNum ( size_t n )

Definition at line 1927 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

Referenced by ParallelCyclotronTracker::deleteParticle(), PartBunchBase< T, Dim >::destroyT(), and PartBunchBase< T, Dim >::updateNumTotal().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setTotalNumPerBunch	(	size_t	numpart,
		short	n
	)

Definition at line 1427 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::bunchTotalNum_m, Hypervolume::n, and PAssert_LT.

Referenced by MultiBunchHandler::calcBunchBeamParameters(), ParallelCyclotronTracker::deleteParticle(), MultiBunchHandler::injectBunch(), and MultiBunchHandler::readBunch().

template<class T, unsigned Dim>

void PartBunchBase< T, Dim >::setup ( AbstractParticle< T, Dim > * pb )

private

Definition at line 1871 of file PartBunchBase.hpp.

Referenced by PartBunchBase< T, Dim >::PartBunchBase().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setUpdateFlag	(	UpdateFlags_t	f,
		bool	val
	)

Definition at line 1952 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::setZ	(	int	i,
		double	zcoo
	)

virtual

Definition at line 871 of file PartBunchBase.hpp.

template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::singleInitNode ( ) const

Definition at line 1957 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m.

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::swap	(	unsigned int	i,
		unsigned int	j
	)

virtual

Reimplemented in PartBunch.

Definition at line 1826 of file PartBunchBase.hpp.

Referenced by PartBunch::swap().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::switchOffUnitlessPositions ( bool use_dt_per_particle = false )

Definition at line 188 of file PartBunchBase.hpp.

References Physics::c, PartBunchBase< T, Dim >::dt, PartBunchBase< T, Dim >::getdT(), PartBunchBase< T, Dim >::getLocalNum(), Attrib::Distribution::R, PartBunchBase< T, Dim >::unit_state_, and units.

Referenced by ParallelTTracker::emitParticles(), and ParallelTTracker::pushParticles().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::switchToUnitlessPositions ( bool use_dt_per_particle = false )

Definition at line 164 of file PartBunchBase.hpp.

References Physics::c, PartBunchBase< T, Dim >::dt, PartBunchBase< T, Dim >::getdT(), PartBunchBase< T, Dim >::getLocalNum(), Attrib::Distribution::R, PartBunchBase< T, Dim >::unit_state_, and PartBunchBase< T, Dim >::unitless.

Referenced by ParallelTTracker::emitParticles(), and ParallelTTracker::pushParticles().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::update ( )

Definition at line 1967 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m, IpplException::what(), and IpplException::where().

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template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::update ( const ParticleAttrib< char > & canSwap )

Definition at line 1976 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbase_m, IpplException::what(), and IpplException::where().

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template<class T = double, unsigned Dim = 3>

virtual void PartBunchBase< T, Dim >::updateDomainLength ( Vektor< int, 3 > & grid )

privatepure virtual

Implemented in AmrPartBunch, and PartBunch.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), PartBunchBase< T, Dim >::boundp_destroyT(), and PartBunchBase< T, Dim >::calcLineDensity().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::updateFields	(	const Vector_t &	hr,
		const Vector_t &	origin
	)

privatevirtual

Reimplemented in AmrPartBunch, and PartBunch.

Definition at line 1866 of file PartBunchBase.hpp.

Referenced by PartBunchBase< T, Dim >::boundp(), and PartBunchBase< T, Dim >::boundp_destroyCycl().

template<class T , unsigned Dim>

void PartBunchBase< T, Dim >::updateNumTotal ( )

Definition at line 305 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::getLocalNum(), reduce(), and PartBunchBase< T, Dim >::setTotalNum().

Referenced by ParallelCyclotronTracker::applyPluginElements(), ParallelTTracker::computeParticleMatterInteraction(), ParallelTTracker::emitParticles(), and ParallelCyclotronTracker::MtsTracker().

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template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::weHaveBins ( ) const

Definition at line 275 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::pbin_m, and PartBins::weHaveBins().

Referenced by PartBunchBase< T, Dim >::boundp_destroyCycl(), Stripper::doCheck(), and ParallelCyclotronTracker::isMultiBunch().

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template<class T , unsigned Dim>

bool PartBunchBase< T, Dim >::weHaveEnergyBins ( )

Definition at line 154 of file PartBunchBase.hpp.

References PartBunchBase< T, Dim >::dist_m, and Distribution::getNumberOfEnergyBins().

Referenced by PartBunchBase< T, Dim >::boundp_destroyT(), ParallelTTracker::computeSpaceChargeFields(), PartBunchBase< T, Dim >::destroyT(), ParallelTTracker::emitParticles(), and ParallelTTracker::execute().

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Member Data Documentation

template<class T = double, unsigned Dim = 3>

ParticleAttrib< Vector_t > PartBunchBase< T, Dim >::Bf

template<class T = double, unsigned Dim = 3>

ParticleAttrib< int > PartBunchBase< T, Dim >::Bin

Definition at line 584 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

std::unique_ptr<size_t[]> PartBunchBase< T, Dim >::binemitted_m

protected

Definition at line 694 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp_destroyT(), PartBunchBase< T, Dim >::calcGammas(), PartBunchBase< T, Dim >::destroyT(), PartBunchBase< T, Dim >::iterateEmittedBin(), and PartBunchBase< T, Dim >::setEnergyBins().

template<class T = double, unsigned Dim = 3>

std::unique_ptr<double[]> PartBunchBase< T, Dim >::bingamma_m

protected

holds the gamma of the bin

Definition at line 689 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::calcGammas(), PartBunchBase< T, Dim >::calcGammas_cycl(), PartBunchBase< T, Dim >::getBinGamma(), and PartBunchBase< T, Dim >::setEnergyBins().

template<class T = double, unsigned Dim = 3>

IpplTimings::TimerRef PartBunchBase< T, Dim >::boundpBoundsTimer_m

protected

Definition at line 622 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), and PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

IpplTimings::TimerRef PartBunchBase< T, Dim >::boundpTimer_m

protected

Definition at line 621 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), and PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

IpplTimings::TimerRef PartBunchBase< T, Dim >::boundpUpdateTimer_m

protected

Definition at line 623 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), and PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

std::vector<size_t> PartBunchBase< T, Dim >::bunchLocalNum_m

protected

Definition at line 710 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::countTotalNumPerBunch(), PartBunchBase< T, Dim >::getLocalNumPerBunch(), PartBunchBase< T, Dim >::setLocalNumPerBunch(), and PartBunchBase< T, Dim >::setNumBunch().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< short > PartBunchBase< T, Dim >::bunchNum

Definition at line 590 of file PartBunchBase.h.

Referenced by Cyclotron::apply(), ParallelCyclotronTracker::bgf_main_collision_test(), MultiBunchHandler::calcBunchBeamParameters(), ParallelCyclotronTracker::calcMeanR(), ParallelCyclotronTracker::computePathLengthUpdate(), PartBunchBase< T, Dim >::countTotalNumPerBunch(), ParallelCyclotronTracker::deleteParticle(), Septum::doCheck(), Probe::doCheck(), Stripper::doCheck(), CCollimator::doCheck(), OutputPlane::doCheck(), MultiBunchHandler::readBunch(), H5PartWrapperForPC::readStepData(), PartBunchBase< T, Dim >::setup(), PartBunchBase< T, Dim >::swap(), and H5PartWrapperForPC::writeStepData().

template<class T = double, unsigned Dim = 3>

std::vector<size_t> PartBunchBase< T, Dim >::bunchTotalNum_m

protected

number of particles per bunch

Definition at line 709 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::countTotalNumPerBunch(), PartBunchBase< T, Dim >::getTotalNumPerBunch(), PartBunchBase< T, Dim >::setNumBunch(), and PartBunchBase< T, Dim >::setTotalNumPerBunch().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< short > PartBunchBase< T, Dim >::cavityGapCrossed

Definition at line 589 of file PartBunchBase.h.

Referenced by ParallelCyclotronTracker::bunchMode_m(), ParallelCyclotronTracker::gapCrossKick_m(), PartBunchBase< T, Dim >::setup(), ParallelCyclotronTracker::singleMode_m(), and PartBunchBase< T, Dim >::swap().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::centroid_m[2 *Dim]

protected

holds the centroid of the beam

Definition at line 641 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::couplingConstant_m

protected

Definition at line 674 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getCouplingConstant(), and PartBunchBase< T, Dim >::setCouplingConstant().

template<class T = double, unsigned Dim = 3>

bool PartBunchBase< T, Dim >::dcBeam_m

protected

Definition at line 727 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::deltaTau_m

Definition at line 608 of file PartBunchBase.h.

Referenced by TrackRun::setupThickTracker(), and TrackRun::setupTTracker().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::dh_m

protected

Mesh enlargement.

Definition at line 683 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), PartBunchBase< T, Dim >::calcLineDensity(), PartBunchBase< T, Dim >::print(), and PartBunchBase< T, Dim >::set_meshEnlargement().

template<class T = double, unsigned Dim = 3>

const unsigned PartBunchBase< T, Dim >::Dimension = Dim

static

Definition at line 59 of file PartBunchBase.h.

Referenced by AmrBoxLib::getEExtrema().

template<class T = double, unsigned Dim = 3>

Distribution* PartBunchBase< T, Dim >::dist_m

protected

Definition at line 723 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

int PartBunchBase< T, Dim >::distDump_m

protected

counter to store the distribution dump

Definition at line 680 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

IpplTimings::TimerRef PartBunchBase< T, Dim >::distrCreate_m

Definition at line 605 of file PartBunchBase.h.

Referenced by Distribution::createOpalT(), and PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

IpplTimings::TimerRef PartBunchBase< T, Dim >::distrReload_m

timer for IC, can not be in Distribution.h

Definition at line 604 of file PartBunchBase.h.

Referenced by Distribution::doRestartOpalCycl(), Distribution::doRestartOpalT(), and PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< double > PartBunchBase< T, Dim >::dt

Definition at line 585 of file PartBunchBase.h.

Referenced by ScatteringPhysics::addParticleBackToBunch(), Source::apply(), FlexibleCollimator::apply(), Undulator::apply(), Degrader::apply(), Monitor::apply(), ParallelTTracker::changeDT(), ParallelTTracker::computeExternalFields(), ScatteringPhysics::copyFromBunch(), Distribution::emitParticles(), ParallelTTracker::evenlyDistributeParticles(), ParallelTTracker::kickParticles(), ParallelTTracker::pushParticles(), PartBunchBase< T, Dim >::setdT(), ParallelTTracker::setTime(), ParallelCyclotronTracker::setTimeStep(), PartBunchBase< T, Dim >::setup(), PartBunchBase< T, Dim >::swap(), PartBunchBase< T, Dim >::switchOffUnitlessPositions(), PartBunchBase< T, Dim >::switchToUnitlessPositions(), ParallelTTracker::timeIntegration2(), ThickTracker::update_m(), and AmrYtWriter::writeParticles_m().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::dt_m

protected

holds the timestep in seconds

Definition at line 644 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getdT(), PartBunchBase< T, Dim >::incrementT(), and PartBunchBase< T, Dim >::setdT().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::dtScInit_m

Definition at line 608 of file PartBunchBase.h.

Referenced by TrackRun::setupThickTracker(), and TrackRun::setupTTracker().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< Vector_t > PartBunchBase< T, Dim >::Ef

Definition at line 580 of file PartBunchBase.h.

Referenced by ScatteringPhysics::addParticleBackToBunch(), CSRIGFWakeFunction::apply(), CSRWakeFunction::apply(), GreenWakeFunction::apply(), ParallelCyclotronTracker::borisExternalFields(), ParallelCyclotronTracker::bunchMode_m(), ParallelTTracker::computeExternalFields(), AmrBoxLib::computeSelfFields_cycl(), ParallelTTracker::computeSpaceChargeFields(), ParallelCyclotronTracker::computeSpaceChargeFields_m(), ParallelTTracker::computeWakefield(), ScatteringPhysics::copyFromBunch(), Distribution::emitParticles(), ParallelTTracker::execute(), ParallelCyclotronTracker::getFieldsAtPoint(), Distribution::injectBeam(), ParallelCyclotronTracker::kick(), ParallelTTracker::kickParticles(), ApplyField< T >::operator()(), PartBunchBase< T, Dim >::setup(), PartBunchBase< T, Dim >::swap(), ParallelTTracker::transformBunch(), AmrYtWriter::writeParticles_m(), H5PartWrapperForPC::writeStepData(), and H5PartWrapperForPT::writeStepData().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< Vector_t > PartBunchBase< T, Dim >::Eftmp

Definition at line 581 of file PartBunchBase.h.

Referenced by AmrBoxLib::computeSelfFields_cycl(), PartBunchBase< T, Dim >::setup(), and PartBunchBase< T, Dim >::swap().

template<class T = double, unsigned Dim = 3>

std::unique_ptr<std::ofstream> PartBunchBase< T, Dim >::f_stream

private

Definition at line 616 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

bool PartBunchBase< T, Dim >::fixed_grid

private

if the grid does not have to adapt

Definition at line 618 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::isGridFixed().

template<class T = double, unsigned Dim = 3>

FieldSolver* PartBunchBase< T, Dim >::fs_m

protected

stores the used field solver

Definition at line 672 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::getFieldSolverType(), PartBunchBase< T, Dim >::hasFieldSolver(), and PartBunchBase< T, Dim >::setSolver().

template<class T = double, unsigned Dim = 3>

Vector_t PartBunchBase< T, Dim >::globalMeanR_m

protected

Initialize the translation vector and rotation quaternion here. Cyclotron tracker will reset these values each timestep TTracker can just use 0 translation and 0 rotation (quat[1 0 0 0]).

Definition at line 655 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getGlobalMeanR(), and PartBunchBase< T, Dim >::setGlobalMeanR().

template<class T = double, unsigned Dim = 3>

std::unique_ptr<size_t[]> PartBunchBase< T, Dim >::globalPartPerNode_m

protected

Definition at line 721 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::calcNumPartsOutside(), PartBunchBase< T, Dim >::gatherLoadBalanceStatistics(), PartBunchBase< T, Dim >::getLoadBalance(), and PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

Quaternion_t PartBunchBase< T, Dim >::globalToLocalQuaternion_m

protected

Definition at line 656 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getGlobalToLocalQuaternion(), and PartBunchBase< T, Dim >::setGlobalToLocalQuaternion().

template<class T = double, unsigned Dim = 3>

long long PartBunchBase< T, Dim >::globalTrackStep_m

protected

if multiple TRACK commands

Definition at line 703 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getGlobalTrackStep(), PartBunchBase< T, Dim >::incTrackSteps(), and PartBunchBase< T, Dim >::setGlobalTrackStep().

template<class T = double, unsigned Dim = 3>

IpplTimings::TimerRef PartBunchBase< T, Dim >::histoTimer_m

protected

Definition at line 626 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

Vector_t PartBunchBase< T, Dim >::hr_m

protected

meshspacing of cartesian mesh

Definition at line 667 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), and PartBunchBase< T, Dim >::get_hr().

template<class T = double, unsigned Dim = 3>

ParticleIndex_t& PartBunchBase< T, Dim >::ID

Definition at line 573 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

long long PartBunchBase< T, Dim >::localTrackStep_m

protected

step in a TRACK command

Definition at line 700 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getLocalTrackStep(), PartBunchBase< T, Dim >::incTrackSteps(), and PartBunchBase< T, Dim >::setLocalTrackStep().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< double > PartBunchBase< T, Dim >::M

Definition at line 578 of file PartBunchBase.h.

Referenced by ScatteringPhysics::addParticleBackToBunch(), Source::apply(), FlexibleCollimator::apply(), Monitor::apply(), Ring::apply(), Cyclotron::apply(), ParallelCyclotronTracker::bgf_main_collision_test(), ScatteringPhysics::copyFromBunch(), RK4< FieldFunction, Arguments >::derivate_m(), Septum::doCheck(), Probe::doCheck(), Stripper::doCheck(), CCollimator::doCheck(), OutputPlane::doCheck(), BeamStrippingPhysics::doPhysics(), Distribution::emitParticles(), ParallelTTracker::evenlyDistributeParticles(), PartBunchBase< T, Dim >::getParticle(), Distribution::injectBeam(), ParallelCyclotronTracker::kick(), LF2< FieldFunction, Arguments >::kick_m(), MultiBunchHandler::readBunch(), H5PartWrapperForPC::readStepData(), MultiBunchHandler::saveBunch(), PartBunchBase< T, Dim >::setMass(), PartBunchBase< T, Dim >::setup(), PartBunchBase< T, Dim >::swap(), BeamStrippingPhysics::transformToSecondary(), Vacuum::updateParticleAttributes(), AmrYtWriter::writeParticles_m(), and H5PartWrapperForPC::writeStepData().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::massPerParticle_m

protected

Definition at line 677 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getMassPerParticle(), PartBunchBase< T, Dim >::setMass(), and PartBunchBase< T, Dim >::setMassZeroPart().

template<class T = double, unsigned Dim = 3>

DistributionMoments PartBunchBase< T, Dim >::momentsComputer_m

protected

Definition at line 724 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

Vektor<int, 3> PartBunchBase< T, Dim >::nr_m

protected

meshsize of cartesian mesh

Definition at line 669 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), and PartBunchBase< T, Dim >::boundp_destroyT().

template<class T = double, unsigned Dim = 3>

short PartBunchBase< T, Dim >::numBunch_m

protected

current bunch number

Definition at line 706 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::countTotalNumPerBunch(), PartBunchBase< T, Dim >::getNumBunch(), PartBunchBase< T, Dim >::resetPartBinBunch(), and PartBunchBase< T, Dim >::setNumBunch().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< Vector_t > PartBunchBase< T, Dim >::P

Definition at line 576 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

std::shared_ptr<AbstractParticle<T, Dim> > PartBunchBase< T, Dim >::pbase_m

protected

Definition at line 729 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

PartBins* PartBunchBase< T, Dim >::pbin_m

Definition at line 601 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::periodLength_m

protected

Definition at line 728 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), and PartBunchBase< T, Dim >::setBeamFrequency().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< double > PartBunchBase< T, Dim >::Phi

Definition at line 579 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::setup(), and PartBunchBase< T, Dim >::swap().

template<class T = double, unsigned Dim = 3>

std::unique_ptr<Inform> PartBunchBase< T, Dim >::pmsg_m

private

Definition at line 615 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< ParticleOrigin > PartBunchBase< T, Dim >::POrigin

Definition at line 587 of file PartBunchBase.h.

Referenced by Stripper::doCheck(), Distribution::emitParticles(), ParallelTTracker::evenlyDistributeParticles(), Distribution::injectBeam(), MultiBunchHandler::readBunch(), MultiBunchHandler::saveBunch(), PartBunchBase< T, Dim >::setup(), TrackRun::setupCyclotronTracker(), PartBunchBase< T, Dim >::swap(), BeamStrippingPhysics::transformToSecondary(), and H5PartWrapperForPT::writeStepData().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< ParticleType > PartBunchBase< T, Dim >::PType

Definition at line 586 of file PartBunchBase.h.

Referenced by BeamStrippingPhysics::doPhysics(), Distribution::emitParticles(), Distribution::injectBeam(), PartBunchBase< T, Dim >::setup(), PartBunchBase< T, Dim >::swap(), BeamStrippingPhysics::transformToSecondary(), and H5PartWrapperForPT::writeStepData().

template<class T = double, unsigned Dim = 3>

ParticleAttrib< double > PartBunchBase< T, Dim >::Q

Definition at line 577 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::qi_m

protected

Definition at line 676 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getChargePerParticle(), PartBunchBase< T, Dim >::print(), PartBunchBase< T, Dim >::setBinCharge(), PartBunchBase< T, Dim >::setCharge(), and PartBunchBase< T, Dim >::setChargeZeroPart().

template<class T = double, unsigned Dim = 3>

ParticlePos_t& PartBunchBase< T, Dim >::R

Definition at line 572 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

const PartData* PartBunchBase< T, Dim >::reference

protected

Definition at line 630 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getE(), PartBunchBase< T, Dim >::getInitialBeta(), PartBunchBase< T, Dim >::getInitialGamma(), PartBunchBase< T, Dim >::getM(), PartBunchBase< T, Dim >::getMomentumTolerance(), PartBunchBase< T, Dim >::getP(), PartBunchBase< T, Dim >::getQ(), PartBunchBase< T, Dim >::getReference(), PartBunchBase< T, Dim >::resetM(), and PartBunchBase< T, Dim >::resetQ().

template<class T = double, unsigned Dim = 3>

Vector_t PartBunchBase< T, Dim >::RefPartP_m

Definition at line 593 of file PartBunchBase.h.

Referenced by Undulator::apply(), ParallelTTracker::applyFractionalStep(), ParallelTTracker::autophaseCavities(), ParallelTTracker::execute(), ParallelTTracker::findStartPosition(), H5PartWrapperForPT::readStepHeader(), ParallelCyclotronTracker::singleParticleDump(), ParallelTTracker::updateReferenceParticle(), ParallelTTracker::updateRefToLabCSTrafo(), StatWriter::write(), ParallelTTracker::writePhaseSpace(), H5PartWrapperForPT::writeStepHeader(), and H5PartWrapperForPC::writeStepHeader().

template<class T = double, unsigned Dim = 3>

Vector_t PartBunchBase< T, Dim >::RefPartR_m

Definition at line 592 of file PartBunchBase.h.

template<class T = double, unsigned Dim = 3>

ParticleOrigin PartBunchBase< T, Dim >::refPOrigin_m

Definition at line 597 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getPOrigin(), and PartBunchBase< T, Dim >::setPOrigin().

template<class T = double, unsigned Dim = 3>

ParticleType PartBunchBase< T, Dim >::refPType_m

Definition at line 598 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getPType(), and PartBunchBase< T, Dim >::setPType().

template<class T = double, unsigned Dim = 3>

Vector_t PartBunchBase< T, Dim >::rmax_m

protected

maximal extend of particles

Definition at line 659 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), PartBunchBase< T, Dim >::calcBeamParameters(), PartBunchBase< T, Dim >::get_maxExtent(), and PartBunchBase< T, Dim >::print().

template<class T = double, unsigned Dim = 3>

Vector_t PartBunchBase< T, Dim >::rmin_m

protected

minimal extend of particles

Definition at line 661 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroyCycl(), PartBunchBase< T, Dim >::calcBeamParameters(), PartBunchBase< T, Dim >::get_origin(), and PartBunchBase< T, Dim >::print().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::rmsDensity_m

protected

Definition at line 664 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::calcDebyeLength(), and PartBunchBase< T, Dim >::get_rmsDensity().

template<class T = double, unsigned Dim = 3>

IpplTimings::TimerRef PartBunchBase< T, Dim >::selfFieldTimer_m

protected

timer for selfField calculation

Definition at line 628 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::spos_m

protected

the position along design trajectory

Definition at line 648 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::get_sPos(), and PartBunchBase< T, Dim >::set_sPos().

template<class T = double, unsigned Dim = 3>

UnitState_t PartBunchBase< T, Dim >::stateOfLastBoundP_

protected

Definition at line 638 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::boundp().

template<class T = double, unsigned Dim = 3>

IpplTimings::TimerRef PartBunchBase< T, Dim >::statParamTimer_m

protected

Definition at line 624 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::calcBeamParameters(), and PartBunchBase< T, Dim >::setup().

template<class T = double, unsigned Dim = 3>

int PartBunchBase< T, Dim >::stepsPerTurn_m

protected

steps per turn for OPAL-cycl

Definition at line 697 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getStepsPerTurn(), and PartBunchBase< T, Dim >::setStepsPerTurn().

template<class T = double, unsigned Dim = 3>

int PartBunchBase< T, Dim >::SteptoLastInj_m

protected

this parameter records the current steps since last bunch injection it helps to inject new bunches correctly in the restart run of OPAL-cycl it is stored during phase space dump.

Definition at line 715 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getSteptoLastInj(), and PartBunchBase< T, Dim >::setSteptoLastInj().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::t_m

protected

holds the actual time of the integration

Definition at line 646 of file PartBunchBase.h.

Referenced by PartBunchBase< T, Dim >::getT(), PartBunchBase< T, Dim >::incrementT(), and PartBunchBase< T, Dim >::setT().

template<class T = double, unsigned Dim = 3>

double PartBunchBase< T, Dim >::tEmission_m

protected

relative enlargement of the mesh