ParallelCyclotronTracker Class Reference

#include <ParallelCyclotronTracker.h>

Inheritance diagram for ParallelCyclotronTracker:

Collaboration diagram for ParallelCyclotronTracker:

Classes
struct	settings

Public Types
enum	MODE { MODE::UNDEFINED = -1, MODE::SINGLE = 0, MODE::SEO = 1, MODE::BUNCH = 2 }
typedef std::vector< double >	dvector_t
typedef std::vector< int >	ivector_t
typedef std::pair< double[8], Component * >	element_pair
typedef std::pair < ElementBase::ElementType, element_pair >	type_pair
typedef std::list< type_pair * >	beamline_list
Public Types inherited from AbstractTracker
enum	{   X, PX, Y, PY,   T, PT }

Public Member Functions
	ParallelCyclotronTracker (const Beamline &bl, PartBunchBase< double, 3 > *bunch, DataSink &ds, const PartData &data, bool revBeam, bool revTrack, int maxSTEPS, int timeIntegrator, const int &numBunch, const double &mbEta, const double &mbPara, const std::string &mbMode, const std::string &mbBinning)
	Constructor. More...
virtual	~ParallelCyclotronTracker ()
virtual void	visitRing (const Ring &ring)
	Apply the algorithm to an Ring. More...
virtual void	visitCyclotron (const Cyclotron &cycl)
	Apply the algorithm to a Cyclotorn. More...
virtual void	visitRFCavity (const RFCavity &)
	Apply the algorithm to a RFCavity. More...
virtual void	visitBeamBeam (const BeamBeam &)
	Apply the algorithm to a BeamBeam. More...
virtual void	visitBeamStripping (const BeamStripping &)
	Apply the algorithm to a Beam Stripping. More...
virtual void	visitCCollimator (const CCollimator &)
	Apply the algorithm to a collimator. More...
virtual void	visitCorrector (const Corrector &)
	Apply the algorithm to a Corrector. More...
virtual void	visitDegrader (const Degrader &)
	Apply the algorithm to a Degrader. More...
virtual void	visitDiagnostic (const Diagnostic &)
	Apply the algorithm to a Diagnostic. More...
virtual void	visitDrift (const Drift &)
	Apply the algorithm to a Drift. More...
virtual void	visitFlexibleCollimator (const FlexibleCollimator &)
	Apply the algorithm to a flexible collimator. More...
virtual void	visitLambertson (const Lambertson &)
	Apply the algorithm to a Lambertson. More...
virtual void	visitMarker (const Marker &)
	Apply the algorithm to a Marker. More...
virtual void	visitMonitor (const Monitor &)
	Apply the algorithm to a Monitor. More...
virtual void	visitMultipole (const Multipole &)
	Apply the algorithm to a Multipole. More...
virtual void	visitMultipoleT (const MultipoleT &)
	Apply the algorithm to a MultipoleT. More...
virtual void	visitMultipoleTStraight (const MultipoleTStraight &)
	Apply the algorithm to a MultipoleTStraight. More...
virtual void	visitMultipoleTCurvedConstRadius (const MultipoleTCurvedConstRadius &)
	Apply the algorithm to a MultipoleTCurvedConstRadius. More...
virtual void	visitMultipoleTCurvedVarRadius (const MultipoleTCurvedVarRadius &)
	Apply the algorithm to a MultipoleTCurvedVarRadius. More...
virtual void	visitOffset (const Offset &)
	Apply the algorithm to a Offset. More...
virtual void	visitProbe (const Probe &)
	Apply the algorithm to a Probe. More...
virtual void	visitRBend (const RBend &)
	Apply the algorithm to a RBend. More...
virtual void	visitRFQuadrupole (const RFQuadrupole &)
	Apply the algorithm to a RFQuadrupole. More...
virtual void	visitSBend (const SBend &)
	Apply the algorithm to a SBend. More...
virtual void	visitSBend3D (const SBend3D &)
	Apply the algorithm to a SBend3D. More...
virtual void	visitScalingFFAMagnet (const ScalingFFAMagnet &bend)
	Apply the algorithm to a ScalingFFAMagnet. More...
virtual void	visitSeparator (const Separator &)
	Apply the algorithm to a Separator. More...
virtual void	visitSeptum (const Septum &)
	Apply the algorithm to a Septum. More...
virtual void	visitSolenoid (const Solenoid &)
	Apply the algorithm to a Solenoid. More...
virtual void	visitStripper (const Stripper &)
	Apply the algorithm to a charge stripper. More...
virtual void	visitParallelPlate (const ParallelPlate &)
	Apply the algorithm to a ParallelPlate, it is empty for cyclotrontracker . More...
virtual void	visitCyclotronValley (const CyclotronValley &)
	Apply the algorithm to a CyclotronValley.it is empty for cyclotrontracker . More...
virtual void	visitVariableRFCavity (const VariableRFCavity &cav)
	Apply the algorithm to a VariabelRFCavity. More...
virtual void	visitVariableRFCavityFringeField (const VariableRFCavityFringeField &cav)
	Apply the algorithm to a VariabelRFCavity. More...
virtual void	visitVerticalFFAMagnet (const VerticalFFAMagnet &bend)
	Apply the algorithm to a VerticalFFAMagnet. More...
virtual void	execute ()
	Apply the algorithm to the top-level beamline. More...
virtual void	visitBeamline (const Beamline &)
	Apply the algorithm to a beam line. More...
void	setLastDumpedStep (const int para)
	set last dumped step More...
void	bgf_main_collision_test ()
void	initializeBoundaryGeometry ()
void	setPr (double x)
	Method for restart. More...
void	setPt (double x)
void	setPz (double x)
void	setR (double x)
void	setTheta (double x)
void	setZ (double x)
void	setBeGa (double x)
void	setPhi (double x)
void	setPsi (double x)
void	setPreviousH5Local (bool x)
Public Member Functions inherited from Tracker
	Tracker (const Beamline &, const PartData &, bool backBeam, bool backTrack)
	Constructor. More...
	Tracker (const Beamline &, PartBunchBase< double, 3 > *bunch, const PartData &, bool backBeam, bool backTrack)
	Constructor. More...
virtual	~Tracker ()
const PartBunchBase< double, 3 > *	getBunch () const
	Return the current bunch. More...
void	addToBunch (const OpalParticle &)
	Add particle to bunch. More...
virtual void	visitComponent (const Component &)
	Store the bunch. More...
virtual void	visitPatch (const Patch &pat)
	Apply the algorithm to a patch. More...
virtual void	visitAlignWrapper (const AlignWrapper &)
	Apply the algorithm to an align wrapper. More...
virtual void	visitTrackIntegrator (const TrackIntegrator &)
	Apply the algorithm to an integrator capable of tracking. More...
virtual void	visitMapIntegrator (const MapIntegrator &)
	Apply the algorithm to an integrator capable of mapping. More...
virtual void	setNumBunch (int)
	set total number of tracked bunches More...
virtual int	getNumBunch ()
	get total number of tracked bunches More...
Public Member Functions inherited from AbstractTracker
	AbstractTracker (const Beamline &, const PartData &, bool backBeam, bool backTrack)
	Constructor. More...
virtual	~AbstractTracker ()
Public Member Functions inherited from DefaultVisitor
	DefaultVisitor (const Beamline &beamline, bool backBeam, bool backTrack)
	Constructor. More...
virtual	~DefaultVisitor ()=0
virtual void	visitRBend3D (const RBend3D &)
	Apply the algorithm to a rectangular bend. More...
virtual void	visitTravelingWave (const TravelingWave &)
	Apply the algorithm to a RF cavity. More...
virtual void	visitSource (const Source &)
	Apply the algorithm to a source. More...
virtual void	visitFlaggedElmPtr (const FlaggedElmPtr &)
	Apply the algorithm to a FlaggedElmPtr. More...
virtual void	visitCorrectorWrapper (const CorrectorWrapper &)
	Apply the algorithm to an corrector wrapper.. More...
virtual void	visitCyclotronWrapper (const CyclotronWrapper &)
	Apply the algorithm to an cyclotron wrapper.. More...
virtual void	visitMultipoleWrapper (const MultipoleWrapper &)
	Apply the algorithm to an multipole wrapper.. More...
virtual void	visitRBendWrapper (const RBendWrapper &)
	Apply the algorithm to an RBend wrapper.. More...
virtual void	visitSBendWrapper (const SBendWrapper &)
	Apply the algorithm to an SBend wrapper.. More...
virtual void	visitIntegrator (const Integrator &)
	Apply the algorithm to a generic integrator. More...
Public Member Functions inherited from BeamlineVisitor
	BeamlineVisitor ()
virtual	~BeamlineVisitor ()

Private Types
typedef std::function< bool(const double &, const size_t &, Vector_t &, Vector_t &)>	function_t

Private Member Functions
	ParallelCyclotronTracker ()
	ParallelCyclotronTracker (const ParallelCyclotronTracker &)
void	operator= (const ParallelCyclotronTracker &)
void	MtsTracker ()
void	GenericTracker ()
bool	getFieldsAtPoint (const double &t, const size_t &Pindex, Vector_t &Efield, Vector_t &Bfield)
void	dumpAngle (const double &theta, double &prevAzimuth, double &azimuth, const short &bunchNr=0)
double	computeRadius (const Vector_t &meanR) const
void	computePathLengthUpdate (std::vector< double > &dl, const double &dt)
void	openFiles (size_t numFiles, std::string fn)
	@ open / close output coordinate files More...
void	closeFiles ()
void	buildupFieldList (double BcParameter[], ElementBase::ElementType elementType, Component *elptr)
double	calculateAngle (double x, double y)
double	calculateAngle2 (double x, double y)
bool	checkGapCross (Vector_t Rold, Vector_t Rnew, RFCavity *rfcavity, double &DistOld)
bool	RFkick (RFCavity *rfcavity, const double t, const double dt, const int Pindex)
bool	getTunes (dvector_t &t, dvector_t &r, dvector_t &z, int lastTurn, double &nur, double &nuz)
Vector_t	calcMeanR (short bunchNr=-1) const
Vector_t	calcMeanP () const
void	repartition ()
void	globalToLocal (ParticleAttrib< Vector_t > &vectorArray, double phi, Vector_t const translationToGlobal=0)
void	localToGlobal (ParticleAttrib< Vector_t > &vectorArray, double phi, Vector_t const translationToGlobal=0)
void	globalToLocal (ParticleAttrib< Vector_t > &vectorArray, Quaternion_t const quaternion, Vector_t const meanR=Vector_t(0.0))
void	localToGlobal (ParticleAttrib< Vector_t > &vectorArray, Quaternion_t const quaternion, Vector_t const meanR=Vector_t(0.0))
void	globalToLocal (ParticleAttrib< Vector_t > &particleVectors, double const phi, double const psi, Vector_t const meanR=Vector_t(0.0))
void	localToGlobal (ParticleAttrib< Vector_t > &particleVectors, double const phi, double const psi, Vector_t const meanR=Vector_t(0.0))
void	globalToLocal (Vector_t &myVector, double const phi, double const psi, Vector_t const meanR=Vector_t(0.0))
void	localToGlobal (Vector_t &myVector, double const phi, double const psi, Vector_t const meanR=Vector_t(0.0))
void	rotateWithQuaternion (ParticleAttrib< Vector_t > &vectorArray, Quaternion_t const quaternion)
void	getQuaternionTwoVectors (Vector_t u, Vector_t v, Quaternion_t &quaternion)
void	normalizeQuaternion (Quaternion_t &quaternion)
void	normalizeVector (Vector_t &vector)
void	rotateAroundZ (ParticleAttrib< Vector_t > &particleVectors, double const phi)
void	rotateAroundX (ParticleAttrib< Vector_t > &particleVectors, double const psi)
void	rotateAroundZ (Vector_t &myVector, double const phi)
void	rotateAroundX (Vector_t &myVector, double const psi)
bool	push (double h)
bool	kick (double h)
void	borisExternalFields (double h)
bool	applyPluginElements (const double dt)
bool	deleteParticle (bool=false)
void	initTrackOrbitFile ()
void	singleParticleDump ()
void	bunchDumpStatData ()
void	bunchDumpPhaseSpaceData ()
void	evaluateSpaceChargeField ()
void	initDistInGlobalFrame ()
void	checkNumPart (std::string s)
double	getHarmonicNumber () const
bool	isTurnDone ()
	Check if turn done. More...
void	update_m (double &t, const double &dt, const bool &finishedTurn)
	Update time and path length, write to output files. More...
std::tuple< double, double, double >	initializeTracking_m ()
void	finalizeTracking_m (dvector_t &Ttime, dvector_t &Tdeltr, dvector_t &Tdeltz, ivector_t &TturnNumber)
void	seoMode_m (double &t, const double dt, bool &finishedTurn, dvector_t &Ttime, dvector_t &Tdeltr, dvector_t &Tdeltz, ivector_t &TturnNumber)
void	singleMode_m (double &t, const double dt, bool &finishedTurn, double &oldReferenceTheta)
void	bunchMode_m (double &t, const double dt, bool &finishedTurn)
void	gapCrossKick_m (size_t i, double t, double dt, const Vector_t &Rold, const Vector_t &Pold)
void	dumpAzimuthAngles_m (const double &t, const Vector_t &R, const Vector_t &P, const double &oldReferenceTheta, const double &temp_meanTheta)
void	dumpThetaEachTurn_m (const double &t, const Vector_t &R, const Vector_t &P, const double &temp_meanTheta, bool &finishedTurn)
void	computeSpaceChargeFields_m ()
bool	computeExternalFields_m (const size_t &i, const double &t, Vector_t &Efield, Vector_t &Bfield)
void	injectBunch (bool &flagTransition)
void	saveInjectValues ()
bool	isMultiBunch () const
bool	hasMultiBunch () const
void	updatePathLength (const double &dt)
void	updateTime (const double &dt)
void	updateAzimuthAndRadius ()
void	initPathLength ()

Private Attributes
beamline_list	FieldDimensions
std::list< Component * >	myElements
Beamline *	itsBeamline
std::vector< PluginElement * >	pluginElements_m
std::vector< CavityCrossData >	cavCrossDatas_m
DataSink *	itsDataSink
BoundaryGeometry *	bgf_m
Cyclotron *	cycl_m
int	maxSteps_m
	The maximal number of steps the system is integrated. More...
double	bega
	The reference variables. More...
double	referenceR
double	referenceTheta
double	referenceZ = 0.0
double	referencePr
double	referencePt
double	referencePz = 0.0
double	referencePtot
double	referencePsi
double	referencePhi
bool	spiral_flag = false
Vector_t	PreviousMeanP
bool	previousH5Local
double	sinRefTheta_m
double	cosRefTheta_m
std::unique_ptr < MultiBunchHandler >	mbHandler_m
int	lastDumpedStep_m
double	pathLength_m
long long	step_m
long long	restartStep0_m
int	turnnumber_m
double	azimuth_m
double	prevAzimuth_m
Vector_t	FDext_m [2]
Vector_t	extE_m
Vector_t	extB_m
const int	myNode_m
const size_t	initialLocalNum_m
const size_t	initialTotalNum_m
std::vector< std::unique_ptr < std::ofstream > >	outfTheta_m
	output coordinates at different azimuthal angles and one after every turn More...
std::vector< double >	azimuth_angle_m
	the different azimuthal angles for the outfTheta_m output files More...
std::ofstream	outfTrackOrbit_m
IpplTimings::TimerRef	IntegrationTimer_m
IpplTimings::TimerRef	DumpTimer_m
IpplTimings::TimerRef	TransformTimer_m
IpplTimings::TimerRef	BinRepartTimer_m
IpplTimings::TimerRef	PluginElemTimer_m
IpplTimings::TimerRef	DelParticleTimer_m
Ring *	opalRing_m
std::unique_ptr< LossDataSink >	lossDs_m
std::unique_ptr< Stepper < function_t > >	itsStepper_mp
struct ParallelCyclotronTracker::settings	setup_m
MODE	mode_m
stepper::INTEGRATOR	stepper_m

Static Private Attributes
static Vector_t const	xaxis = Vector_t(1.0, 0.0, 0.0)
	The positive axes unit vectors. More...
static Vector_t const	yaxis = Vector_t(0.0, 1.0, 0.0)
static Vector_t const	zaxis = Vector_t(0.0, 0.0, 1.0)

Additional Inherited Members
Public Attributes inherited from Tracker
FieldList	cavities_m
	set multipacting flag More...
const Beamline &	itsBeamline_m
Protected Member Functions inherited from Tracker
void	applyDrift (double length)
	Apply a drift length. More...
void	applyThinMultipole (const BMultipoleField &field, double factor)
void	applyThinSBend (const BMultipoleField &field, double scale, double h)
void	applyTransform (const Euclid3D &, double refLength=0.0)
	Apply a geometric transformation. More...
FTps< double, 2 >	buildMultipoleVectorPotential2D (const BMultipoleField &)
	Construct vector potential for a Multipole. More...
FTps< double, 6 >	buildMultipoleVectorPotential (const BMultipoleField &)
	Construct vector potential for a Multipole. More...
FTps< double, 2 >	buildSBendVectorPotential2D (const BMultipoleField &, double h)
	Construct vector potential for a SBend. More...
FTps< double, 6 >	buildSBendVectorPotential (const BMultipoleField &, double h)
	Construct vector potential for a SBend. More...
Protected Attributes inherited from Tracker
PartBunchBase< double, 3 > *	itsBunch_m
	The bunch of particles to be tracked. More...
Protected Attributes inherited from AbstractTracker
const PartData	itsReference
	The reference information. More...
Protected Attributes inherited from DefaultVisitor
const Beamline &	itsLine
bool	back_beam
bool	back_track
bool	back_path
double	flip_B
double	flip_s

Detailed Description

Definition at line 47 of file ParallelCyclotronTracker.h.

Member Typedef Documentation

typedef std::list<type_pair *> ParallelCyclotronTracker::beamline_list

Definition at line 61 of file ParallelCyclotronTracker.h.

typedef std::vector<double> ParallelCyclotronTracker::dvector_t

Definition at line 57 of file ParallelCyclotronTracker.h.

typedef std::pair<double[8], Component *> ParallelCyclotronTracker::element_pair

Definition at line 59 of file ParallelCyclotronTracker.h.

typedef std::function<bool(const double&, const size_t&, Vector_t&, Vector_t&)> ParallelCyclotronTracker::function_t

private

Definition at line 456 of file ParallelCyclotronTracker.h.

typedef std::vector<int> ParallelCyclotronTracker::ivector_t

Definition at line 58 of file ParallelCyclotronTracker.h.

typedef std::pair<ElementBase::ElementType, element_pair> ParallelCyclotronTracker::type_pair

Definition at line 60 of file ParallelCyclotronTracker.h.

Member Enumeration Documentation

enum ParallelCyclotronTracker::MODE

strong

Enumerator
UNDEFINED
SINGLE
SEO
BUNCH

Definition at line 51 of file ParallelCyclotronTracker.h.

Constructor & Destructor Documentation

ParallelCyclotronTracker::ParallelCyclotronTracker	(	const Beamline &	beamline,
		PartBunchBase< double, 3 > *	bunch,
		DataSink &	ds,
		const PartData &	reference,
		bool	revBeam,
		bool	revTrack,
		int	maxSTEPS,
		int	timeIntegrator,
		const int &	numBunch,
		const double &	mbEta,
		const double &	mbPara,
		const std::string &	mbMode,
		const std::string &	mbBinning
	)

Constructor.

Constructor ParallelCyclotronTracker

Parameters

beamline
bunch
ds
reference
revBeam
revTrack
maxSTEPS
timeIntegrator

Definition at line 110 of file ParallelCyclotronTracker.cpp.

References BinRepartTimer_m, BUNCH, ElementBase::clone(), DelParticleTimer_m, DumpTimer_m, IpplTimings::getTimer(), initialTotalNum_m, IntegrationTimer_m, itsBeamline, itsDataSink, stepper::LF2, mbHandler_m, mode_m, stepper::MTS, PluginElemTimer_m, stepper::RK4, SEO, SINGLE, stepper_m, TransformTimer_m, stepper::UNDEFINED, and UNDEFINED.

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ParallelCyclotronTracker::~ParallelCyclotronTracker ( )

virtual

Destructor ParallelCyclotronTracker

Definition at line 172 of file ParallelCyclotronTracker.cpp.

References bgf_m, FieldDimensions, itsBeamline, lossDs_m, and myElements.

ParallelCyclotronTracker::ParallelCyclotronTracker ( )

private

ParallelCyclotronTracker::ParallelCyclotronTracker ( const ParallelCyclotronTracker &  )

private

Member Function Documentation

bool ParallelCyclotronTracker::applyPluginElements ( const double  dt )

private

Definition at line 2119 of file ParallelCyclotronTracker.cpp.

References ElementBase::BEAMSTRIPPING, BeamStripping::checkBeamStripping(), cycl_m, endl(), FieldDimensions, PartBunchBase< T, Dim >::getT(), PartBunchBase< T, Dim >::getTotalNum(), Tracker::itsBunch_m, pluginElements_m, PluginElemTimer_m, PartBunchBase< T, Dim >::R, IpplTimings::startTimer(), IpplTimings::stopTimer(), turnnumber_m, and PartBunchBase< T, Dim >::updateNumTotal().

Referenced by borisExternalFields(), bunchMode_m(), GenericTracker(), and singleMode_m().

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void ParallelCyclotronTracker::bgf_main_collision_test

(

)

Here we check if a particle is outside the domain, flag it for deletion

Definition at line 186 of file ParallelCyclotronTracker.cpp.

References bgf_m, PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::bunchNum, endl(), PartBunchBase< T, Dim >::getdT(), getHarmonicNumber(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getT(), PartBunchBase< T, Dim >::ID, INFORM_ALL_NODES, Tracker::itsBunch_m, level4(), lossDs_m, PartBunchBase< T, Dim >::P, BoundaryGeometry::partInside(), PartBunchBase< T, Dim >::PType, PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::R, and turnnumber_m.

Referenced by bunchMode_m(), and singleMode_m().

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void ParallelCyclotronTracker::borisExternalFields ( double  h )

private

Definition at line 2088 of file ParallelCyclotronTracker.cpp.

References applyPluginElements(), PartBunchBase< T, Dim >::Bf, computeExternalFields_m(), deleteParticle(), PartBunchBase< T, Dim >::Ef, PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getT(), IntegrationTimer_m, Tracker::itsBunch_m, kick(), push(), IpplTimings::startTimer(), and IpplTimings::stopTimer().

Referenced by MtsTracker().

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void ParallelCyclotronTracker::buildupFieldList ( double  BcParameter[], ElementBase::ElementType  elementType, Component *  elptr  )

private

Parameters

BcParameter
ElementType
elptr

Definition at line 1164 of file ParallelCyclotronTracker.cpp.

References ElementBase::CYCLOTRON, FieldDimensions, and ElementBase::RING.

Referenced by visitBeamStripping(), visitCCollimator(), visitCyclotron(), visitProbe(), visitRFCavity(), visitRing(), visitSeptum(), and visitStripper().

void ParallelCyclotronTracker::bunchDumpPhaseSpaceData ( )

private

Definition at line 2715 of file ParallelCyclotronTracker.cpp.

References acos(), atan2(), Options::BUNCH_MEAN, calcMeanP(), calcMeanR(), calculateAngle(), computeRadius(), cos(), Physics::deg2rad, dot(), DataSink::dumpH5(), DumpTimer_m, endl(), extB_m, extE_m, FDext_m, FieldDimensions, PartBunchBase< T, Dim >::get_meanKineticEnergy(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getT(), PartBunchBase< T, Dim >::getTotalNum(), Options::GLOBAL, globalToLocal(), isMultiBunch(), Tracker::itsBunch_m, itsDataSink, lastDumpedStep_m, localToGlobal(), max(), PartBunchBase< T, Dim >::P, pi, Options::psDumpFrame, Options::psDumpFreq, PartBunchBase< T, Dim >::R, referencePr, referencePt, referencePtot, referencePz, referenceR, referenceTheta, referenceZ, sin(), sqrt(), IpplTimings::startTimer(), step_m, and IpplTimings::stopTimer().

Referenced by initDistInGlobalFrame(), and update_m().

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void ParallelCyclotronTracker::bunchDumpStatData ( )

private

Definition at line 2593 of file ParallelCyclotronTracker.cpp.

References acos(), azimuth_m, Options::BUNCH_MEAN, PartBunchBase< T, Dim >::calcBeamParameters(), calcMeanP(), calcMeanR(), calculateAngle(), dot(), dumpAngle(), DataSink::dumpSDDS(), DumpTimer_m, extB_m, extE_m, FDext_m, FieldDimensions, PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getT(), Options::GLOBAL, globalToLocal(), isMultiBunch(), Tracker::itsBunch_m, itsDataSink, localToGlobal(), mbHandler_m, PartBunchBase< T, Dim >::P, pi, prevAzimuth_m, Options::psDumpFrame, PartBunchBase< T, Dim >::R, Physics::rad2deg, sqrt(), IpplTimings::startTimer(), IpplTimings::stopTimer(), updateAzimuthAndRadius(), and DataSink::writeMultiBunchStatistics().

Referenced by initDistInGlobalFrame(), and update_m().

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void ParallelCyclotronTracker::bunchMode_m ( double &  t, const double  dt, bool &  finishedTurn  )

private

Definition at line 3183 of file ParallelCyclotronTracker.cpp.

References applyPluginElements(), Communicate::barrier(), PartBunchBase< T, Dim >::Bf, bgf_main_collision_test(), PartBunchBase< T, Dim >::Bin, calcMeanP(), PartBunchBase< T, Dim >::cavityGapCrossed, IpplInfo::Comm, computeSpaceChargeFields_m(), deleteParticle(), PartBunchBase< T, Dim >::Ef, endl(), gapCrossKick_m(), PartBunchBase< T, Dim >::getLocalNum(), getQuaternionTwoVectors(), PartBunchBase< T, Dim >::getTotalNum(), globalToLocal(), PartBunchBase< T, Dim >::hasFieldSolver(), injectBunch(), IntegrationTimer_m, isMultiBunch(), isTurnDone(), Tracker::itsBunch_m, itsStepper_mp, mbHandler_m, PartBunchBase< T, Dim >::P, PreviousMeanP, PartBunchBase< T, Dim >::R, Options::rebinFreq, ParallelCyclotronTracker::settings::scSolveFreq, setup_m, singleParticleDump(), Options::sptDumpFreq, IpplTimings::startTimer(), step_m, IpplTimings::stopTimer(), and turnnumber_m.

Referenced by GenericTracker().

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Vector_t ParallelCyclotronTracker::calcMeanP ( ) const

private

Definition at line 1721 of file ParallelCyclotronTracker.cpp.

References PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getTotalNum(), Tracker::itsBunch_m, PartBunchBase< T, Dim >::P, and reduce().

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), bunchMode_m(), computeSpaceChargeFields_m(), deleteParticle(), initDistInGlobalFrame(), and MtsTracker().

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Vector_t ParallelCyclotronTracker::calcMeanR ( short  bunchNr = -1 ) const

private

Definition at line 1698 of file ParallelCyclotronTracker.cpp.

References PartBunchBase< T, Dim >::bunchNum, PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getTotalNum(), PartBunchBase< T, Dim >::getTotalNumPerBunch(), Tracker::itsBunch_m, Hypervolume::n, PartBunchBase< T, Dim >::R, and reduce().

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), computeSpaceChargeFields_m(), deleteParticle(), initDistInGlobalFrame(), MtsTracker(), saveInjectValues(), and updateAzimuthAndRadius().

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double ParallelCyclotronTracker::calculateAngle ( double  x, double  y  )

inlineprivate

Parameters

x
y

Returns

angle range [0~2PI) degree

Definition at line 555 of file ParallelCyclotronTracker.h.

References atan2(), and Physics::two_pi.

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), deleteParticle(), initDistInGlobalFrame(), MtsTracker(), saveInjectValues(), seoMode_m(), and updateAzimuthAndRadius().

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double ParallelCyclotronTracker::calculateAngle2 ( double  x, double  y  )

inlineprivate

Parameters

x
y

Returns

angle range [-PI~PI) degree

Definition at line 569 of file ParallelCyclotronTracker.h.

References atan2().

Referenced by MtsTracker(), and singleMode_m().

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bool ParallelCyclotronTracker::checkGapCross ( Vector_t  Rold, Vector_t  Rnew, RFCavity *  rfcavity, double &  Dold  )

private

Parameters

Rold
Rnew
elptr
Dold

Returns

Definition at line 1561 of file ParallelCyclotronTracker.cpp.

References RFCavity::getCosAzimuth(), RFCavity::getPerpenDistance(), and RFCavity::getSinAzimuth().

Referenced by gapCrossKick_m().

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void ParallelCyclotronTracker::checkNumPart ( std::string  s )

private

Definition at line 1195 of file ParallelCyclotronTracker.cpp.

References endl(), PartBunchBase< T, Dim >::getLocalNum(), Tracker::itsBunch_m, and reduce().

Referenced by initDistInGlobalFrame().

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void ParallelCyclotronTracker::closeFiles ( )

private

Close all files related to special output in the Cyclotron mode.

Definition at line 317 of file ParallelCyclotronTracker.cpp.

References outfTheta_m.

Referenced by finalizeTracking_m().

bool ParallelCyclotronTracker::computeExternalFields_m ( const size_t &  i, const double &  t, Vector_t &  Efield, Vector_t &  Bfield  )

private

Definition at line 3466 of file ParallelCyclotronTracker.cpp.

References FieldDimensions.

Referenced by borisExternalFields(), and getFieldsAtPoint().

void ParallelCyclotronTracker::computePathLengthUpdate ( std::vector< double > &  dl, const double &  dt  )

private

Definition at line 247 of file ParallelCyclotronTracker.cpp.

References allreduce(), Options::BUNCH_MEAN, PartBunchBase< T, Dim >::bunchNum, c_mmtns, dot(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getTotalNum(), PartBunchBase< T, Dim >::getTotalNumPerBunch(), isMultiBunch(), Tracker::itsBunch_m, PartBunchBase< T, Dim >::P, Options::psDumpFrame, sqrt(), and sum().

Referenced by updatePathLength().

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double ParallelCyclotronTracker::computeRadius ( const Vector_t &  meanR ) const

private

Definition at line 241 of file ParallelCyclotronTracker.cpp.

References sqrt().

Referenced by bunchDumpPhaseSpaceData(), saveInjectValues(), and updateAzimuthAndRadius().

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void ParallelCyclotronTracker::computeSpaceChargeFields_m ( )

private

Definition at line 3376 of file ParallelCyclotronTracker.cpp.

References PartBunchBase< T, Dim >::Bf, PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::boundp_destroy(), Options::boundpDestroyFreq, PartBunchBase< T, Dim >::calcGammas_cycl(), calcMeanP(), calcMeanR(), PartBunchBase< T, Dim >::computeSelfFields_cycl(), dot(), PartBunchBase< T, Dim >::Ef, PartBunchBase< T, Dim >::getChargePerParticle(), PartBunchBase< T, Dim >::getFieldSolverType(), PartBunchBase< T, Dim >::getLastemittedBin(), getQuaternionTwoVectors(), globalToLocal(), hasMultiBunch(), Tracker::itsBunch_m, localToGlobal(), PreviousMeanP, PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::R, repartition(), PartBunchBase< T, Dim >::setBinCharge(), PartBunchBase< T, Dim >::setGlobalMeanR(), PartBunchBase< T, Dim >::setGlobalToLocalQuaternion(), spiral_flag, sqrt(), step_m, and yaxis.

Referenced by bunchMode_m(), and MtsTracker().

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bool ParallelCyclotronTracker::deleteParticle ( bool  flagNeedUpdate = false )

private

Definition at line 2152 of file ParallelCyclotronTracker.cpp.

References acos(), allreduce(), PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::boundp(), PartBunchBase< T, Dim >::bunchNum, PartBunchBase< T, Dim >::calcBeamParameters(), calcMeanP(), calcMeanR(), calculateAngle(), Options::delPartFreq, DelParticleTimer_m, PartBunchBase< T, Dim >::destroy(), dot(), endl(), PartBunchBase< T, Dim >::getLastemittedBin(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getLocalNumPerBunch(), PartBunchBase< T, Dim >::getNumBunch(), globalToLocal(), isMultiBunch(), Tracker::itsBunch_m, localToGlobal(), mbHandler_m, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::performDestroy(), pi, PartBunchBase< T, Dim >::R, reduce(), PartBunchBase< T, Dim >::setLocalBinCount(), PartBunchBase< T, Dim >::setLocalNumPerBunch(), PartBunchBase< T, Dim >::setTotalNum(), PartBunchBase< T, Dim >::setTotalNumPerBunch(), sqrt(), IpplTimings::startTimer(), step_m, IpplTimings::stopTimer(), and sum().

Referenced by borisExternalFields(), bunchMode_m(), GenericTracker(), and singleMode_m().

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void ParallelCyclotronTracker::dumpAngle ( const double &  theta, double &  prevAzimuth, double &  azimuth, const short &  bunchNr = 0  )

private

Definition at line 216 of file ParallelCyclotronTracker.cpp.

References OpalData::getInstance(), and turnnumber_m.

Referenced by bunchDumpStatData(), saveInjectValues(), and updateAzimuthAndRadius().

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void ParallelCyclotronTracker::dumpAzimuthAngles_m ( const double &  t, const Vector_t &  R, const Vector_t &  P, const double &  oldReferenceTheta, const double &  temp_meanTheta  )

inlineprivate

Definition at line 3327 of file ParallelCyclotronTracker.cpp.

References azimuth_angle_m, cos(), ParallelCyclotronTracker::settings::deltaTheta, endl(), outfTheta_m, Attrib::Distribution::R, Physics::rad2deg, setup_m, sin(), and turnnumber_m.

Referenced by MtsTracker(), and singleMode_m().

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void ParallelCyclotronTracker::dumpThetaEachTurn_m ( const double &  t, const Vector_t &  R, const Vector_t &  P, const double &  temp_meanTheta, bool &  finishedTurn  )

inlineprivate

Definition at line 3348 of file ParallelCyclotronTracker.cpp.

References cos(), Physics::deg2rad, endl(), isTurnDone(), outfTheta_m, Attrib::Distribution::R, sin(), sqrt(), and turnnumber_m.

Referenced by MtsTracker(), and singleMode_m().

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void ParallelCyclotronTracker::evaluateSpaceChargeField ( )

private

void ParallelCyclotronTracker::execute ( )

virtual

Apply the algorithm to the top-level beamline.

Reimplemented from DefaultVisitor.

Definition at line 1208 of file ParallelCyclotronTracker.cpp.

References ElementBase::accept(), OpalData::APPEND, Options::asciidump, azimuth_m, bgf_m, cavCrossDatas_m, ElementBase::CCOLLIMATOR, endl(), extB_m, extE_m, FDext_m, FieldDimensions, GenericTracker(), RFCavity::getCosAzimuth(), getFieldsAtPoint(), OpalData::getGlobalGeometry(), OpalData::getInstance(), PartBunchBase< T, Dim >::getNumBunch(), RFCavity::getPerpenDistance(), RFCavity::getSinAzimuth(), ElementBase::getTypeString(), isMultiBunch(), itsBeamline, Tracker::itsBunch_m, itsStepper_mp, stepper::LF2, Ring::lockRing(), lossDs_m, mbHandler_m, stepper::MTS, MtsTracker(), opalRing_m, pluginElements_m, prevAzimuth_m, ElementBase::PROBE, restartStep0_m, ElementBase::RFCAVITY, stepper::RK4, ElementBase::SEPTUM, OpalData::setOpenMode(), step_m, stepper_m, ElementBase::STRIPPER, turnnumber_m, stepper::UNDEFINED, DumpEMFields::writeFields(), and DumpFields::writeFields().

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void ParallelCyclotronTracker::finalizeTracking_m ( dvector_t &  Ttime, dvector_t &  Tdeltr, dvector_t &  Tdeltz, ivector_t &  TturnNumber  )

private

Definition at line 3001 of file ParallelCyclotronTracker.cpp.

References Communicate::barrier(), BUNCH, PartBunchBase< T, Dim >::calcBeamParameters(), closeFiles(), IpplInfo::Comm, endl(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getM(), PartBunchBase< T, Dim >::getTotalNum(), getTunes(), PartBunchBase< T, Dim >::ID, isMultiBunch(), Tracker::itsBunch_m, lastDumpedStep_m, mode_m, myNode_m, outfTrackOrbit_m, PartBunchBase< T, Dim >::P, pow(), SEO, SINGLE, sqrt(), turnnumber_m, and UNDEFINED.

Referenced by GenericTracker(), and MtsTracker().

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void ParallelCyclotronTracker::gapCrossKick_m ( size_t  i, double  t, double  dt, const Vector_t &  Rold, const Vector_t &  Pold  )

private

Definition at line 3278 of file ParallelCyclotronTracker.cpp.

References Physics::c, PartBunchBase< T, Dim >::cavityGapCrossed, checkGapCross(), dot(), FieldDimensions, Tracker::itsBunch_m, itsStepper_mp, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::R, ElementBase::RFCAVITY, RFkick(), and sqrt().

Referenced by bunchMode_m(), and singleMode_m().

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void ParallelCyclotronTracker::GenericTracker ( )

private

Definition at line 1452 of file ParallelCyclotronTracker.cpp.

References applyPluginElements(), BUNCH, bunchMode_m(), deleteParticle(), endl(), finalizeTracking_m(), PartBunchBase< T, Dim >::getTotalNum(), initializeTracking_m(), Tracker::itsBunch_m, maxSteps_m, mode_m, SEO, seoMode_m(), SINGLE, singleMode_m(), step_m, UNDEFINED, and update_m().

Referenced by execute().

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bool ParallelCyclotronTracker::getFieldsAtPoint ( const double &  t, const size_t &  Pindex, Vector_t &  Efield, Vector_t &  Bfield  )

private

Definition at line 1530 of file ParallelCyclotronTracker.cpp.

References PartBunchBase< T, Dim >::Bf, computeExternalFields_m(), PartBunchBase< T, Dim >::Ef, PartBunchBase< T, Dim >::hasFieldSolver(), PartBunchBase< T, Dim >::ID, and Tracker::itsBunch_m.

Referenced by execute().

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double ParallelCyclotronTracker::getHarmonicNumber ( ) const

private

Definition at line 1686 of file ParallelCyclotronTracker.cpp.

References FieldDimensions, Cyclotron::getCyclHarm(), Ring::getHarmonicNumber(), and opalRing_m.

Referenced by bgf_main_collision_test(), and initializeTracking_m().

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void ParallelCyclotronTracker::getQuaternionTwoVectors ( Vector_t  u, Vector_t  v, Quaternion_t &  quaternion  )

inlineprivate

Definition at line 1973 of file ParallelCyclotronTracker.cpp.

References cos(), cross(), dot(), fabs(), normalizeQuaternion(), normalizeVector(), pi, sin(), sqrt(), xaxis, and zaxis.

Referenced by bunchMode_m(), and computeSpaceChargeFields_m().

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bool ParallelCyclotronTracker::getTunes ( dvector_t &  t, dvector_t &  r, dvector_t &  z, int  lastTurn, double &  nur, double &  nuz  )

private

Parameters

t
r
z
lastTurn
nur
nuz

Returns

Definition at line 1619 of file ParallelCyclotronTracker.cpp.

References endl(), for_each(), TUNE_class::lombAnalysis(), sum(), and AbstractTracker::T.

Referenced by finalizeTracking_m().

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void ParallelCyclotronTracker::globalToLocal ( ParticleAttrib< Vector_t > &  vectorArray, double  phi, Vector_t const  translationToGlobal = 0  )

private

Definition at line 1743 of file ParallelCyclotronTracker.cpp.

References cos(), dot(), PartBunchBase< T, Dim >::getLocalNum(), Tracker::itsBunch_m, sin(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TransformTimer_m.

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), bunchMode_m(), computeSpaceChargeFields_m(), deleteParticle(), initDistInGlobalFrame(), and MtsTracker().

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void ParallelCyclotronTracker::globalToLocal ( ParticleAttrib< Vector_t > &  vectorArray, Quaternion_t const  quaternion, Vector_t const  meanR = Vector_t(0.0)  )

inlineprivate

Definition at line 1776 of file ParallelCyclotronTracker.cpp.

References rotateWithQuaternion(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TransformTimer_m.

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void ParallelCyclotronTracker::globalToLocal ( ParticleAttrib< Vector_t > &  particleVectors, double const  phi, double const  psi, Vector_t const  meanR = Vector_t(0.0)  )

inlineprivate

Definition at line 1805 of file ParallelCyclotronTracker.cpp.

References rotateAroundX(), rotateAroundZ(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TransformTimer_m.

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void ParallelCyclotronTracker::globalToLocal ( Vector_t &  myVector, double const  phi, double const  psi, Vector_t const  meanR = Vector_t(0.0)  )

inlineprivate

Definition at line 1826 of file ParallelCyclotronTracker.cpp.

References rotateAroundX(), rotateAroundZ(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TransformTimer_m.

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bool ParallelCyclotronTracker::hasMultiBunch ( ) const

inlineprivate

Definition at line 582 of file ParallelCyclotronTracker.h.

References isMultiBunch(), and mbHandler_m.

Referenced by computeSpaceChargeFields_m().

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void ParallelCyclotronTracker::initDistInGlobalFrame ( )

private

Definition at line 2309 of file ParallelCyclotronTracker.cpp.

References acos(), PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::boundp(), bunchDumpPhaseSpaceData(), bunchDumpStatData(), PartBunchBase< T, Dim >::calcBeamParameters(), calcMeanP(), calcMeanR(), calculateAngle(), checkNumPart(), cosRefTheta_m, PartBunchBase< T, Dim >::countTotalNumPerBunch(), Physics::deg2rad, dot(), endl(), PartBunchBase< T, Dim >::get_sPos(), OpalData::getInstance(), Options::GLOBAL, globalToLocal(), PartBunchBase< T, Dim >::ID, initialLocalNum_m, initialTotalNum_m, isMultiBunch(), Tracker::itsBunch_m, localToGlobal(), mbHandler_m, PartBunchBase< T, Dim >::P, pathLength_m, pi, Options::psDumpFrame, PartBunchBase< T, Dim >::R, referencePhi, referencePr, referencePsi, referencePt, referencePz, referenceR, referenceTheta, referenceZ, repartition(), saveInjectValues(), sinRefTheta_m, sqrt(), and step_m.

Referenced by initializeTracking_m().

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void ParallelCyclotronTracker::initializeBoundaryGeometry

(

)

std::tuple< double, double, double > ParallelCyclotronTracker::initializeTracking_m ( )

private

Returns

the time t [ns], time step dt [ns] and the azimuth angle [rad]

Definition at line 2892 of file ParallelCyclotronTracker.cpp.

References azimuth_angle_m, BUNCH, Physics::deg2rad, ParallelCyclotronTracker::settings::deltaTheta, endl(), PartBunchBase< T, Dim >::getdT(), getHarmonicNumber(), OpalData::getInputBasename(), OpalData::getInstance(), PartBunchBase< T, Dim >::getLocalTrackStep(), IpplInfo::getNodes(), PartBunchBase< T, Dim >::getNumBunch(), PartBunchBase< T, Dim >::getStepsPerTurn(), PartBunchBase< T, Dim >::getT(), initDistInGlobalFrame(), initPathLength(), initTrackOrbitFile(), isMultiBunch(), Tracker::itsBunch_m, mbHandler_m, mode_m, openFiles(), pi, Options::rebinFreq, referenceTheta, Options::repartFreq, restartStep0_m, Options::scSolveFreq, ParallelCyclotronTracker::settings::scSolveFreq, SEO, setup_m, SINGLE, spiral_flag, Options::sptDumpFreq, step_m, ParallelCyclotronTracker::settings::stepsNextCheck, ParallelCyclotronTracker::settings::stepsPerTurn, turnnumber_m, and UNDEFINED.

Referenced by GenericTracker(), and MtsTracker().

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void ParallelCyclotronTracker::initPathLength ( )

private

multi-bunch mode: set the path length of each bunch in case of restart mode

At creation of DataSink the lines are rewinded properly –> the last entry of the path length is therefore the initial path length at restart.

Precondition

In order to work properly in restart mode, the lines in the multi-bunch *.smb files need to be rewinded first.

Definition at line 3590 of file ParallelCyclotronTracker.cpp.

References isMultiBunch(), itsDataSink, mbHandler_m, and DataSink::setMultiBunchInitialPathLengh().

Referenced by initializeTracking_m().

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void ParallelCyclotronTracker::initTrackOrbitFile ( )

private

Definition at line 2287 of file ParallelCyclotronTracker.cpp.

References endl(), OpalData::getInputBasename(), OpalData::getInstance(), PartBunchBase< T, Dim >::getLocalTrackStep(), Tracker::itsBunch_m, myNode_m, and outfTrackOrbit_m.

Referenced by initializeTracking_m().

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void ParallelCyclotronTracker::injectBunch ( bool &  flagTransition )

private

Definition at line 3481 of file ParallelCyclotronTracker.cpp.

References endl(), isMultiBunch(), Tracker::itsBunch_m, AbstractTracker::itsReference, mbHandler_m, saveInjectValues(), setup_m, step_m, ParallelCyclotronTracker::settings::stepsNextCheck, ParallelCyclotronTracker::settings::stepsPerTurn, and turnnumber_m.

Referenced by bunchMode_m(), and MtsTracker().

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bool ParallelCyclotronTracker::isMultiBunch ( ) const

inlineprivate

Definition at line 576 of file ParallelCyclotronTracker.h.

References Tracker::itsBunch_m, mbHandler_m, and PartBunchBase< T, Dim >::weHaveBins().

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), bunchMode_m(), computePathLengthUpdate(), deleteParticle(), execute(), finalizeTracking_m(), hasMultiBunch(), initDistInGlobalFrame(), initializeTracking_m(), initPathLength(), injectBunch(), MtsTracker(), saveInjectValues(), updateAzimuthAndRadius(), updatePathLength(), updateTime(), and visitCyclotron().

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bool ParallelCyclotronTracker::isTurnDone ( )

private

Check if turn done.

Definition at line 2847 of file ParallelCyclotronTracker.cpp.

References setup_m, step_m, and ParallelCyclotronTracker::settings::stepsPerTurn.

Referenced by bunchMode_m(), dumpThetaEachTurn_m(), MtsTracker(), and seoMode_m().

bool ParallelCyclotronTracker::kick ( double  h )

private

Definition at line 2068 of file ParallelCyclotronTracker.cpp.

References PartBunchBase< T, Dim >::Bf, PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::Ef, PartBunchBase< T, Dim >::getLocalNum(), IntegrationTimer_m, Tracker::itsBunch_m, BorisPusher::kick(), PartBunchBase< T, Dim >::M, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::Q, Physics::q_e, PartBunchBase< T, Dim >::R, IpplTimings::startTimer(), and IpplTimings::stopTimer().

Referenced by borisExternalFields(), and MtsTracker().

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void ParallelCyclotronTracker::localToGlobal ( ParticleAttrib< Vector_t > &  vectorArray, double  phi, Vector_t const  translationToGlobal = 0  )

private

Definition at line 1759 of file ParallelCyclotronTracker.cpp.

References cos(), dot(), PartBunchBase< T, Dim >::getLocalNum(), Tracker::itsBunch_m, sin(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TransformTimer_m.

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), computeSpaceChargeFields_m(), deleteParticle(), initDistInGlobalFrame(), and MtsTracker().

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void ParallelCyclotronTracker::localToGlobal ( ParticleAttrib< Vector_t > &  vectorArray, Quaternion_t const  quaternion, Vector_t const  meanR = Vector_t(0.0)  )

inlineprivate

Definition at line 1789 of file ParallelCyclotronTracker.cpp.

References rotateWithQuaternion(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TransformTimer_m.

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void ParallelCyclotronTracker::localToGlobal ( ParticleAttrib< Vector_t > &  particleVectors, double const  phi, double const  psi, Vector_t const  meanR = Vector_t(0.0)  )

inlineprivate

Definition at line 1847 of file ParallelCyclotronTracker.cpp.

References rotateAroundX(), rotateAroundZ(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TransformTimer_m.

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void ParallelCyclotronTracker::localToGlobal ( Vector_t &  myVector, double const  phi, double const  psi, Vector_t const  meanR = Vector_t(0.0)  )

inlineprivate

Definition at line 1868 of file ParallelCyclotronTracker.cpp.

References rotateAroundX(), rotateAroundZ(), IpplTimings::startTimer(), IpplTimings::stopTimer(), and TransformTimer_m.

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void ParallelCyclotronTracker::MtsTracker ( )

private

Definition at line 1310 of file ParallelCyclotronTracker.cpp.

References Communicate::barrier(), borisExternalFields(), BUNCH, calcMeanP(), calcMeanR(), calculateAngle(), calculateAngle2(), IpplInfo::Comm, computeSpaceChargeFields_m(), dumpAzimuthAngles_m(), dumpThetaEachTurn_m(), endl(), finalizeTracking_m(), PartBunchBase< T, Dim >::getTotalNum(), globalToLocal(), PartBunchBase< T, Dim >::hasFieldSolver(), initializeTracking_m(), injectBunch(), isMultiBunch(), isTurnDone(), Tracker::itsBunch_m, kick(), localToGlobal(), max(), maxSteps_m, mbHandler_m, mode_m, Options::mtsSubsteps, Hypervolume::n, PartBunchBase< T, Dim >::P, pi, PartBunchBase< T, Dim >::R, Options::rebinFreq, Options::repartFreq, repartition(), SINGLE, singleParticleDump(), Options::sptDumpFreq, step_m, turnnumber_m, update_m(), and PartBunchBase< T, Dim >::updateNumTotal().

Referenced by execute().

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void ParallelCyclotronTracker::normalizeQuaternion ( Quaternion_t &  quaternion )

inlineprivate

Definition at line 1903 of file ParallelCyclotronTracker.cpp.

References dot(), fabs(), and sqrt().

Referenced by getQuaternionTwoVectors().

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void ParallelCyclotronTracker::normalizeVector ( Vector_t &  vector )

inlineprivate

Definition at line 1915 of file ParallelCyclotronTracker.cpp.

References dot(), fabs(), and sqrt().

Referenced by getQuaternionTwoVectors().

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void ParallelCyclotronTracker::openFiles ( size_t  numFiles, std::string  SfileName  )

private

@ open / close output coordinate files

Parameters

fn	Base file name

Definition at line 291 of file ParallelCyclotronTracker.cpp.

References endl(), and outfTheta_m.

Referenced by initializeTracking_m().

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void ParallelCyclotronTracker::operator= ( const ParallelCyclotronTracker &  )

private

bool ParallelCyclotronTracker::push ( double  h )

private

Definition at line 2020 of file ParallelCyclotronTracker.cpp.

References PartBunchBase< T, Dim >::Bin, Physics::c, cavCrossDatas_m, dot(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getT(), IntegrationTimer_m, Tracker::itsBunch_m, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::R, RFkick(), sqrt(), IpplTimings::startTimer(), and IpplTimings::stopTimer().

Referenced by borisExternalFields().

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void ParallelCyclotronTracker::repartition ( )

private

Definition at line 1734 of file ParallelCyclotronTracker.cpp.

References Communicate::barrier(), BinRepartTimer_m, IpplInfo::Comm, PartBunchBase< T, Dim >::do_binaryRepart(), Tracker::itsBunch_m, Options::repartFreq, IpplTimings::startTimer(), step_m, and IpplTimings::stopTimer().

Referenced by computeSpaceChargeFields_m(), initDistInGlobalFrame(), and MtsTracker().

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bool ParallelCyclotronTracker::RFkick ( RFCavity *  rfcavity, const double  t, const double  dt, const int  Pindex  )

private

Definition at line 1577 of file ParallelCyclotronTracker.cpp.

References PartBunchBase< T, Dim >::getM(), RFCavity::getMomentaKick(), RFCavity::getPerpenDistance(), PartBunchBase< T, Dim >::getQ(), RFCavity::getRmax(), RFCavity::getRmin(), PartBunchBase< T, Dim >::ID, Tracker::itsBunch_m, PartBunchBase< T, Dim >::P, pow(), PartBunchBase< T, Dim >::R, and sqrt().

Referenced by gapCrossKick_m(), and push().

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void ParallelCyclotronTracker::rotateAroundX ( ParticleAttrib< Vector_t > &  particleVectors, double const  psi  )

inlineprivate

Definition at line 1950 of file ParallelCyclotronTracker.cpp.

References cos(), dot(), PartBunchBase< T, Dim >::getLocalNum(), Tracker::itsBunch_m, and sin().

Referenced by globalToLocal(), and localToGlobal().

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void ParallelCyclotronTracker::rotateAroundX ( Vector_t &  myVector, double const  psi  )

inlineprivate

Definition at line 1963 of file ParallelCyclotronTracker.cpp.

References cos(), dot(), and sin().

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void ParallelCyclotronTracker::rotateAroundZ ( ParticleAttrib< Vector_t > &  particleVectors, double const  phi  )

inlineprivate

Definition at line 1927 of file ParallelCyclotronTracker.cpp.

References cos(), dot(), PartBunchBase< T, Dim >::getLocalNum(), Tracker::itsBunch_m, and sin().

Referenced by globalToLocal(), and localToGlobal().

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void ParallelCyclotronTracker::rotateAroundZ ( Vector_t &  myVector, double const  phi  )

inlineprivate

Definition at line 1940 of file ParallelCyclotronTracker.cpp.

References cos(), dot(), and sin().

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void ParallelCyclotronTracker::rotateWithQuaternion ( ParticleAttrib< Vector_t > &  vectorArray, Quaternion_t const  quaternion  )

inlineprivate

Definition at line 1889 of file ParallelCyclotronTracker.cpp.

References cross(), dot(), PartBunchBase< T, Dim >::getLocalNum(), and Tracker::itsBunch_m.

Referenced by globalToLocal(), and localToGlobal().

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void ParallelCyclotronTracker::saveInjectValues ( )

private

Definition at line 3516 of file ParallelCyclotronTracker.cpp.

References MultiBunchHandler::injection_t::azimuth, azimuth_m, calcMeanR(), calculateAngle(), computeRadius(), dumpAngle(), PartBunchBase< T, Dim >::get_sPos(), PartBunchBase< T, Dim >::getT(), isMultiBunch(), Tracker::itsBunch_m, mbHandler_m, MultiBunchHandler::injection_t::pathlength, prevAzimuth_m, Physics::rad2deg, MultiBunchHandler::injection_t::radius, and MultiBunchHandler::injection_t::time.

Referenced by initDistInGlobalFrame(), and injectBunch().

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void ParallelCyclotronTracker::seoMode_m ( double &  t, const double  dt, bool &  finishedTurn, dvector_t &  Ttime, dvector_t &  Tdeltr, dvector_t &  Tdeltz, ivector_t &  TturnNumber  )

private

Definition at line 3066 of file ParallelCyclotronTracker.cpp.

References calculateAngle(), cos(), Physics::e, endl(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::ID, IntegrationTimer_m, isTurnDone(), Tracker::itsBunch_m, itsStepper_mp, outfTrackOrbit_m, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::R, sin(), Options::sptDumpFreq, IpplTimings::startTimer(), step_m, IpplTimings::stopTimer(), and turnnumber_m.

Referenced by GenericTracker().

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void ParallelCyclotronTracker::setBeGa ( double  x )

inline

Definition at line 205 of file ParallelCyclotronTracker.h.

References bega.

void ParallelCyclotronTracker::setLastDumpedStep ( const int  para )

inline

set last dumped step

Definition at line 196 of file ParallelCyclotronTracker.h.

References lastDumpedStep_m.

void ParallelCyclotronTracker::setPhi ( double  x )

inline

Definition at line 206 of file ParallelCyclotronTracker.h.

References referencePhi.

void ParallelCyclotronTracker::setPr ( double  x )

inline

Method for restart.

Definition at line 199 of file ParallelCyclotronTracker.h.

References referencePr.

void ParallelCyclotronTracker::setPreviousH5Local ( bool  x )

inline

Definition at line 208 of file ParallelCyclotronTracker.h.

References previousH5Local.

void ParallelCyclotronTracker::setPsi ( double  x )

inline

Definition at line 207 of file ParallelCyclotronTracker.h.

References referencePsi.

void ParallelCyclotronTracker::setPt ( double  x )

inline

Definition at line 200 of file ParallelCyclotronTracker.h.

References referencePt.

void ParallelCyclotronTracker::setPz ( double  x )

inline

Definition at line 201 of file ParallelCyclotronTracker.h.

References referencePz.

void ParallelCyclotronTracker::setR ( double  x )

inline

Definition at line 202 of file ParallelCyclotronTracker.h.

References referenceR.

void ParallelCyclotronTracker::setTheta ( double  x )

inline

Definition at line 203 of file ParallelCyclotronTracker.h.

References referenceTheta.

void ParallelCyclotronTracker::setZ ( double  x )

inline

Definition at line 204 of file ParallelCyclotronTracker.h.

References referenceZ.

void ParallelCyclotronTracker::singleMode_m ( double &  t, const double  dt, bool &  finishedTurn, double &  oldReferenceTheta  )

private

Definition at line 3117 of file ParallelCyclotronTracker.cpp.

References applyPluginElements(), bgf_main_collision_test(), PartBunchBase< T, Dim >::Bin, calculateAngle2(), PartBunchBase< T, Dim >::cavityGapCrossed, deleteParticle(), dumpAzimuthAngles_m(), dumpThetaEachTurn_m(), endl(), gapCrossKick_m(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::ID, IntegrationTimer_m, Tracker::itsBunch_m, itsStepper_mp, outfTrackOrbit_m, PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::R, Options::sptDumpFreq, IpplTimings::startTimer(), step_m, and IpplTimings::stopTimer().

Referenced by GenericTracker().

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void ParallelCyclotronTracker::singleParticleDump ( )

private

Definition at line 2463 of file ParallelCyclotronTracker.cpp.

References Communicate::barrier(), IpplInfo::Comm, COMM_ANY_NODE, DumpTimer_m, endl(), ERRORMSG, Message::get(), PartBunchBase< T, Dim >::getLocalNum(), IpplInfo::getNodes(), PartBunchBase< T, Dim >::ID, IPPL_APP_CYCLE, IPPL_APP_TAG4, Tracker::itsBunch_m, myNode_m, TagMaker::next_tag(), outfTrackOrbit_m, PartBunchBase< T, Dim >::P, Message::put(), PartBunchBase< T, Dim >::R, Communicate::receive_block(), PartBunchBase< T, Dim >::RefPartP_m, PartBunchBase< T, Dim >::RefPartR_m, IpplTimings::startTimer(), and IpplTimings::stopTimer().

Referenced by bunchMode_m(), and MtsTracker().

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void ParallelCyclotronTracker::update_m ( double &  t, const double &  dt, const bool &  finishedTurn  )

private

Update time and path length, write to output files.

Definition at line 2852 of file ParallelCyclotronTracker.cpp.

References bunchDumpPhaseSpaceData(), bunchDumpStatData(), endl(), PartBunchBase< T, Dim >::getTotalNum(), Tracker::itsBunch_m, mode_m, pluginElements_m, Options::psDumpEachTurn, Options::psDumpFreq, SEO, PartBunchBase< T, Dim >::setLocalTrackStep(), Options::statDumpFreq, step_m, updatePathLength(), and updateTime().

Referenced by GenericTracker(), and MtsTracker().

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void ParallelCyclotronTracker::updateAzimuthAndRadius ( )

private

Definition at line 3574 of file ParallelCyclotronTracker.cpp.

References MultiBunchHandler::beaminfo_t::azimuth, calcMeanR(), calculateAngle(), computeRadius(), dumpAngle(), isMultiBunch(), mbHandler_m, MultiBunchHandler::beaminfo_t::prevAzimuth, Physics::rad2deg, and MultiBunchHandler::beaminfo_t::radius.

Referenced by bunchDumpStatData().

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void ParallelCyclotronTracker::updatePathLength ( const double &  dt )

private

Definition at line 3540 of file ParallelCyclotronTracker.cpp.

References computePathLengthUpdate(), isMultiBunch(), Tracker::itsBunch_m, mbHandler_m, pathLength_m, and PartBunchBase< T, Dim >::set_sPos().

Referenced by update_m().

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void ParallelCyclotronTracker::updateTime ( const double &  dt )

private

Definition at line 3561 of file ParallelCyclotronTracker.cpp.

References Physics::e, PartBunchBase< T, Dim >::getT(), isMultiBunch(), Tracker::itsBunch_m, mbHandler_m, and PartBunchBase< T, Dim >::setT().

Referenced by update_m().

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void ParallelCyclotronTracker::visitBeamBeam ( const BeamBeam &  )

virtual

Apply the algorithm to a BeamBeam.

Not implemented and most probable never used

Reimplemented from DefaultVisitor.

Definition at line 559 of file ParallelCyclotronTracker.cpp.

References endl().

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void ParallelCyclotronTracker::visitBeamline ( const Beamline &  bl )

virtual

Apply the algorithm to a beam line.

Parameters

bl

Reimplemented from DefaultVisitor.

Definition at line 1190 of file ParallelCyclotronTracker.cpp.

References TBeamline< T >::iterate().

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void ParallelCyclotronTracker::visitBeamStripping ( const BeamStripping &  bstp )

virtual

Apply the algorithm to a Beam Stripping.

Reimplemented from DefaultVisitor.

Definition at line 564 of file ParallelCyclotronTracker.cpp.

References ElementBase::BEAMSTRIPPING, buildupFieldList(), ElementBase::clone(), endl(), BeamStripping::getPressure(), BeamStripping::getPressureMapFN(), BeamStripping::getPScale(), BeamStripping::getResidualGas(), BeamStripping::getStop(), BeamStripping::getTemperature(), BeamStripping::initialise(), Tracker::itsBunch_m, and myElements.

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void ParallelCyclotronTracker::visitCCollimator ( const CCollimator &  coll )

virtual

Apply the algorithm to a collimator.

Parameters

coll

Reimplemented from DefaultVisitor.

Definition at line 601 of file ParallelCyclotronTracker.cpp.

References buildupFieldList(), ElementBase::CCOLLIMATOR, ElementBase::clone(), endl(), CCollimator::getWidth(), PluginElement::getXEnd(), PluginElement::getXStart(), PluginElement::getYEnd(), PluginElement::getYStart(), CCollimator::getZEnd(), CCollimator::getZStart(), PluginElement::initialise(), Tracker::itsBunch_m, and myElements.

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void ParallelCyclotronTracker::visitCorrector ( const Corrector &  corr )

virtual

Apply the algorithm to a Corrector.

Parameters

corr

Reimplemented from DefaultVisitor.

Definition at line 647 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitCyclotron ( const Cyclotron &  cycl )

virtual

Apply the algorithm to a Cyclotorn.

Parameters

cycl

To ease the initialise() function, set a integral parameter fieldflag internally. Its value is by the option "TYPE" of the element "CYCLOTRON" fieldflag = 1, readin PSI format measured field file (default) fieldflag = 2, readin carbon cyclotron field file created by Jianjun Yang, TYPE=CARBONCYCL fieldflag = 3, readin ANSYS format file for CYCIAE-100 created by Jianjun Yang, TYPE=CYCIAE fieldflag = 4, readin AVFEQ format file for Riken cyclotrons fieldflag = 5, readin FFA format file for MSU/FNAL FFA fieldflag = 6, readin both median plane B field map and 3D E field map of RF cavity for compact cyclotron fieldflag = 7, read in fields for Daniel's synchrocyclotron simulations

Reimplemented from DefaultVisitor.

Definition at line 385 of file ParallelCyclotronTracker.cpp.

References bega, buildupFieldList(), ElementBase::clone(), cos(), cosRefTheta_m, cycl_m, ElementBase::CYCLOTRON, Physics::deg2rad, Physics::e, endl(), PartData::getBeta(), Cyclotron::getBScale(), Cyclotron::getCyclHarm(), Cyclotron::getCyclotronType(), Cyclotron::getFieldFlag(), Cyclotron::getFieldMapFN(), PartData::getGamma(), OpalData::getInstance(), Cyclotron::getMaxR(), Cyclotron::getMaxZ(), Cyclotron::getMinR(), Cyclotron::getMinZ(), Cyclotron::getNumberOfTrimcoils(), Cyclotron::getPHIinit(), Cyclotron::getPRinit(), Cyclotron::getPZinit(), Cyclotron::getRinit(), Cyclotron::getRmax(), Cyclotron::getRmin(), Cyclotron::getSpiralFlag(), Cyclotron::getSymmetry(), Cyclotron::getZinit(), Options::GLOBAL, Cyclotron::initialise(), isMultiBunch(), Tracker::itsBunch_m, AbstractTracker::itsReference, mbHandler_m, myElements, previousH5Local, Options::psDumpFrame, referencePhi, referencePr, referencePsi, referencePt, referencePtot, referencePz, referenceR, referenceTheta, referenceZ, sin(), sinRefTheta_m, spiral_flag, and sqrt().

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void ParallelCyclotronTracker::visitCyclotronValley ( const CyclotronValley &  cv )

virtual

Apply the algorithm to a CyclotronValley.it is empty for cyclotrontracker .

Parameters

cv

Reimplemented from DefaultVisitor.

Definition at line 1102 of file ParallelCyclotronTracker.cpp.

void ParallelCyclotronTracker::visitDegrader ( const Degrader &  deg )

virtual

Apply the algorithm to a Degrader.

Parameters

degrader

Reimplemented from DefaultVisitor.

Definition at line 657 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitDiagnostic ( const Diagnostic &  diag )

virtual

Apply the algorithm to a Diagnostic.

Parameters

diag

Reimplemented from DefaultVisitor.

Definition at line 669 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitDrift ( const Drift &  drift )

virtual

Apply the algorithm to a Drift.

Parameters

drift

Reimplemented from DefaultVisitor.

Definition at line 679 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitFlexibleCollimator ( const FlexibleCollimator &  )

virtual

Apply the algorithm to a flexible collimator.

Parameters

Reimplemented from DefaultVisitor.

Definition at line 689 of file ParallelCyclotronTracker.cpp.

void ParallelCyclotronTracker::visitLambertson ( const Lambertson &  lamb )

virtual

Apply the algorithm to a Lambertson.

Parameters

lamb

Reimplemented from DefaultVisitor.

Definition at line 698 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitMarker ( const Marker &  marker )

virtual

Apply the algorithm to a Marker.

Parameters

marker

Reimplemented from DefaultVisitor.

Definition at line 719 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), and myElements.

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void ParallelCyclotronTracker::visitMonitor ( const Monitor &  corr )

virtual

Apply the algorithm to a Monitor.

Parameters

corr

Reimplemented from DefaultVisitor.

Definition at line 730 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), and myElements.

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void ParallelCyclotronTracker::visitMultipole ( const Multipole &  mult )

virtual

Apply the algorithm to a Multipole.

Parameters

mult

Reimplemented from DefaultVisitor.

Definition at line 741 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitMultipoleT ( const MultipoleT &  multT )

virtual

Apply the algorithm to a MultipoleT.

Parameters

multT

Reimplemented from DefaultVisitor.

Definition at line 751 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), MultipoleT::clone(), endl(), myElements, and opalRing_m.

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void ParallelCyclotronTracker::visitMultipoleTCurvedConstRadius ( const MultipoleTCurvedConstRadius &  multTccurv )

virtual

Apply the algorithm to a MultipoleTCurvedConstRadius.

Parameters

multTccurv

Reimplemented from DefaultVisitor.

Definition at line 783 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), MultipoleTCurvedConstRadius::clone(), endl(), myElements, and opalRing_m.

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void ParallelCyclotronTracker::visitMultipoleTCurvedVarRadius ( const MultipoleTCurvedVarRadius &  multTvcurv )

virtual

Apply the algorithm to a MultipoleTCurvedVarRadius.

Parameters

multTvcurv

Reimplemented from DefaultVisitor.

Definition at line 799 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), MultipoleTCurvedVarRadius::clone(), endl(), myElements, and opalRing_m.

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void ParallelCyclotronTracker::visitMultipoleTStraight ( const MultipoleTStraight &  multTstraight )

virtual

Apply the algorithm to a MultipoleTStraight.

Parameters

multTstraight

Reimplemented from DefaultVisitor.

Definition at line 767 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), MultipoleTStraight::clone(), endl(), myElements, and opalRing_m.

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void ParallelCyclotronTracker::visitOffset ( const Offset &  off )

virtual

Apply the algorithm to a Offset.

Reimplemented from DefaultVisitor.

Definition at line 703 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), Ring::getNextNormal(), Ring::getNextPosition(), opalRing_m, and Offset::updateGeometry().

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void ParallelCyclotronTracker::visitParallelPlate ( const ParallelPlate &  pplate )

virtual

Apply the algorithm to a ParallelPlate, it is empty for cyclotrontracker .

Parameters

pplate

Reimplemented from DefaultVisitor.

Definition at line 1089 of file ParallelCyclotronTracker.cpp.

void ParallelCyclotronTracker::visitProbe ( const Probe &  prob )

virtual

Apply the algorithm to a Probe.

Parameters

prob

Reimplemented from DefaultVisitor.

Definition at line 815 of file ParallelCyclotronTracker.cpp.

References buildupFieldList(), ElementBase::clone(), endl(), ElementBase::getName(), PluginElement::getXEnd(), PluginElement::getXStart(), PluginElement::getYEnd(), PluginElement::getYStart(), PluginElement::initialise(), Tracker::itsBunch_m, myElements, and ElementBase::PROBE.

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void ParallelCyclotronTracker::visitRBend ( const RBend &  bend )

virtual

Apply the algorithm to a RBend.

Parameters

bend

Reimplemented from DefaultVisitor.

Definition at line 854 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitRFCavity ( const RFCavity &  as )

virtual

Apply the algorithm to a RFCavity.

Parameters

as

Reimplemented from DefaultVisitor.

Definition at line 911 of file ParallelCyclotronTracker.cpp.

References buildupFieldList(), ElementBase::clone(), endl(), RFCavity::getAmplitudeModelName(), RFCavity::getAzimuth(), RFCavity::getComponentType(), RFCavity::getCycFrequency(), RFCavity::getFieldMapFN(), RFCavity::getFrequencyModelName(), RFCavity::getGapWidth(), RFCavity::getPerpenDistance(), RFCavity::getPhaseModelName(), RFCavity::getPhi0(), RFCavity::getRmax(), RFCavity::getRmin(), AbstractTimeDependence::getTimeDependence(), RFCavity::initialise(), Tracker::itsBunch_m, myElements, and ElementBase::RFCAVITY.

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void ParallelCyclotronTracker::visitRFQuadrupole ( const RFQuadrupole &  rfq )

virtual

Apply the algorithm to a RFQuadrupole.

Parameters

rfq

Reimplemented from DefaultVisitor.

Definition at line 1002 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitRing ( const Ring &  ring )

virtual

Apply the algorithm to an Ring.

Parameters

ring

Reimplemented from DefaultVisitor.

Definition at line 327 of file ParallelCyclotronTracker.cpp.

References buildupFieldList(), Ring::clone(), cos(), cosRefTheta_m, Physics::deg2rad, endl(), Ring::getBeamPhiInit(), Ring::getBeamPRInit(), Ring::getBeamRInit(), PartData::getBeta(), PartData::getGamma(), Ring::getHarmonicNumber(), Ring::getSymmetry(), Ring::initialise(), Tracker::itsBunch_m, AbstractTracker::itsReference, myElements, opalRing_m, referencePr, referencePt, referencePtot, referencePz, referenceR, referenceTheta, referenceZ, ElementBase::RING, sin(), sinRefTheta_m, and sqrt().

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void ParallelCyclotronTracker::visitSBend ( const SBend &  bend )

virtual

Apply the algorithm to a SBend.

Parameters

bend

Reimplemented from DefaultVisitor.

Definition at line 1012 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitSBend3D ( const SBend3D &  bend )

virtual

Apply the algorithm to a SBend3D.

Reimplemented from DefaultVisitor.

Definition at line 859 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), endl(), and opalRing_m.

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void ParallelCyclotronTracker::visitScalingFFAMagnet ( const ScalingFFAMagnet &  bend )

virtual

Apply the algorithm to a ScalingFFAMagnet.

Reimplemented from DefaultVisitor.

Definition at line 868 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), endl(), and opalRing_m.

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void ParallelCyclotronTracker::visitSeparator ( const Separator &  sep )

virtual

Apply the algorithm to a Separator.

Parameters

sep

Reimplemented from DefaultVisitor.

Definition at line 1022 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::getElementLength(), and myElements.

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void ParallelCyclotronTracker::visitSeptum ( const Septum &  sept )

virtual

Apply the algorithm to a Septum.

Parameters

sept

Reimplemented from DefaultVisitor.

Definition at line 1032 of file ParallelCyclotronTracker.cpp.

References buildupFieldList(), ElementBase::clone(), endl(), Septum::getWidth(), PluginElement::getXEnd(), PluginElement::getXStart(), PluginElement::getYEnd(), PluginElement::getYStart(), Septum::initialise(), Tracker::itsBunch_m, myElements, and ElementBase::SEPTUM.

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void ParallelCyclotronTracker::visitSolenoid ( const Solenoid &  solenoid )

virtual

Apply the algorithm to a Solenoid.

Parameters

solenoid

Reimplemented from DefaultVisitor.

Definition at line 1075 of file ParallelCyclotronTracker.cpp.

References ElementBase::clone(), endl(), ElementBase::hasAttribute(), and myElements.

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void ParallelCyclotronTracker::visitStripper ( const Stripper &  stripper )

virtual

Apply the algorithm to a charge stripper.

Parameters

stripper

Reimplemented from DefaultVisitor.

Definition at line 1112 of file ParallelCyclotronTracker.cpp.

References buildupFieldList(), ElementBase::clone(), endl(), ElementBase::getName(), Stripper::getOPCharge(), Stripper::getOPMass(), Stripper::getStop(), PluginElement::getXEnd(), PluginElement::getXStart(), PluginElement::getYEnd(), PluginElement::getYStart(), PluginElement::initialise(), Tracker::itsBunch_m, myElements, and ElementBase::STRIPPER.

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void ParallelCyclotronTracker::visitVariableRFCavity ( const VariableRFCavity &  cav )

virtual

Apply the algorithm to a VariabelRFCavity.

Reimplemented from DefaultVisitor.

Definition at line 878 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), endl(), and opalRing_m.

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void ParallelCyclotronTracker::visitVariableRFCavityFringeField ( const VariableRFCavityFringeField &  cav )

virtual

Apply the algorithm to a VariabelRFCavity.

Reimplemented from DefaultVisitor.

Definition at line 888 of file ParallelCyclotronTracker.cpp.

References endl().

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void ParallelCyclotronTracker::visitVerticalFFAMagnet ( const VerticalFFAMagnet &  bend )

virtual

Apply the algorithm to a VerticalFFAMagnet.

Reimplemented from DefaultVisitor.

Definition at line 897 of file ParallelCyclotronTracker.cpp.

References Ring::appendElement(), endl(), and opalRing_m.

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Member Data Documentation

std::vector<double> ParallelCyclotronTracker::azimuth_angle_m

private

the different azimuthal angles for the outfTheta_m output files

Definition at line 314 of file ParallelCyclotronTracker.h.

Referenced by dumpAzimuthAngles_m(), and initializeTracking_m().

double ParallelCyclotronTracker::azimuth_m

private

Definition at line 286 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpStatData(), execute(), and saveInjectValues().

double ParallelCyclotronTracker::bega

private

The reference variables.

Definition at line 241 of file ParallelCyclotronTracker.h.

Referenced by setBeGa(), and visitCyclotron().

BoundaryGeometry* ParallelCyclotronTracker::bgf_m

private

Definition at line 228 of file ParallelCyclotronTracker.h.

Referenced by bgf_main_collision_test(), execute(), and ~ParallelCyclotronTracker().

IpplTimings::TimerRef ParallelCyclotronTracker::BinRepartTimer_m

private

Definition at line 337 of file ParallelCyclotronTracker.h.

Referenced by ParallelCyclotronTracker(), and repartition().

std::vector<CavityCrossData> ParallelCyclotronTracker::cavCrossDatas_m

private

Definition at line 224 of file ParallelCyclotronTracker.h.

Referenced by execute(), and push().

double ParallelCyclotronTracker::cosRefTheta_m

private

Definition at line 261 of file ParallelCyclotronTracker.h.

Referenced by initDistInGlobalFrame(), visitCyclotron(), and visitRing().

Cyclotron* ParallelCyclotronTracker::cycl_m

private

Definition at line 230 of file ParallelCyclotronTracker.h.

Referenced by applyPluginElements(), and visitCyclotron().

IpplTimings::TimerRef ParallelCyclotronTracker::DelParticleTimer_m

private

Definition at line 339 of file ParallelCyclotronTracker.h.

Referenced by deleteParticle(), and ParallelCyclotronTracker().

IpplTimings::TimerRef ParallelCyclotronTracker::DumpTimer_m

private

Definition at line 335 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), ParallelCyclotronTracker(), and singleParticleDump().

Vector_t ParallelCyclotronTracker::extB_m

private

Definition at line 305 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), and execute().

Vector_t ParallelCyclotronTracker::extE_m

private

Definition at line 305 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), and execute().

Vector_t ParallelCyclotronTracker::FDext_m[2]

private

Definition at line 305 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), and execute().

beamline_list ParallelCyclotronTracker::FieldDimensions

private

Definition at line 220 of file ParallelCyclotronTracker.h.

Referenced by applyPluginElements(), buildupFieldList(), bunchDumpPhaseSpaceData(), bunchDumpStatData(), computeExternalFields_m(), execute(), gapCrossKick_m(), getHarmonicNumber(), and ~ParallelCyclotronTracker().

const size_t ParallelCyclotronTracker::initialLocalNum_m

private

Definition at line 308 of file ParallelCyclotronTracker.h.

Referenced by initDistInGlobalFrame().

const size_t ParallelCyclotronTracker::initialTotalNum_m

private

Definition at line 309 of file ParallelCyclotronTracker.h.

Referenced by initDistInGlobalFrame(), and ParallelCyclotronTracker().

IpplTimings::TimerRef ParallelCyclotronTracker::IntegrationTimer_m

private

Definition at line 334 of file ParallelCyclotronTracker.h.

Referenced by borisExternalFields(), bunchMode_m(), kick(), ParallelCyclotronTracker(), push(), seoMode_m(), and singleMode_m().

Beamline* ParallelCyclotronTracker::itsBeamline

private

Definition at line 222 of file ParallelCyclotronTracker.h.

Referenced by execute(), ParallelCyclotronTracker(), and ~ParallelCyclotronTracker().

DataSink* ParallelCyclotronTracker::itsDataSink

private

Definition at line 226 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), bunchDumpStatData(), initPathLength(), and ParallelCyclotronTracker().

std::unique_ptr< Stepper<function_t> > ParallelCyclotronTracker::itsStepper_mp

private

Definition at line 458 of file ParallelCyclotronTracker.h.

Referenced by bunchMode_m(), execute(), gapCrossKick_m(), seoMode_m(), and singleMode_m().

int ParallelCyclotronTracker::lastDumpedStep_m

private

Definition at line 266 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), finalizeTracking_m(), and setLastDumpedStep().

std::unique_ptr<LossDataSink> ParallelCyclotronTracker::lossDs_m

private

Definition at line 447 of file ParallelCyclotronTracker.h.

Referenced by bgf_main_collision_test(), execute(), and ~ParallelCyclotronTracker().

int ParallelCyclotronTracker::maxSteps_m

private

The maximal number of steps the system is integrated.

Definition at line 233 of file ParallelCyclotronTracker.h.

Referenced by GenericTracker(), and MtsTracker().

std::unique_ptr<MultiBunchHandler> ParallelCyclotronTracker::mbHandler_m

private

Definition at line 264 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpStatData(), bunchMode_m(), deleteParticle(), execute(), hasMultiBunch(), initDistInGlobalFrame(), initializeTracking_m(), initPathLength(), injectBunch(), isMultiBunch(), MtsTracker(), ParallelCyclotronTracker(), saveInjectValues(), updateAzimuthAndRadius(), updatePathLength(), updateTime(), and visitCyclotron().

MODE ParallelCyclotronTracker::mode_m

private

Definition at line 467 of file ParallelCyclotronTracker.h.

Referenced by finalizeTracking_m(), GenericTracker(), initializeTracking_m(), MtsTracker(), ParallelCyclotronTracker(), and update_m().

std::list<Component *> ParallelCyclotronTracker::myElements

private

Definition at line 221 of file ParallelCyclotronTracker.h.

Referenced by visitBeamStripping(), visitCCollimator(), visitCorrector(), visitCyclotron(), visitDegrader(), visitDiagnostic(), visitDrift(), visitLambertson(), visitMarker(), visitMonitor(), visitMultipole(), visitMultipoleT(), visitMultipoleTCurvedConstRadius(), visitMultipoleTCurvedVarRadius(), visitMultipoleTStraight(), visitProbe(), visitRBend(), visitRFCavity(), visitRFQuadrupole(), visitRing(), visitSBend(), visitSeparator(), visitSeptum(), visitSolenoid(), visitStripper(), and ~ParallelCyclotronTracker().

const int ParallelCyclotronTracker::myNode_m

private

Definition at line 307 of file ParallelCyclotronTracker.h.

Referenced by finalizeTracking_m(), initTrackOrbitFile(), and singleParticleDump().

Ring* ParallelCyclotronTracker::opalRing_m

private

Definition at line 444 of file ParallelCyclotronTracker.h.

Referenced by execute(), getHarmonicNumber(), visitMultipoleT(), visitMultipoleTCurvedConstRadius(), visitMultipoleTCurvedVarRadius(), visitMultipoleTStraight(), visitOffset(), visitRing(), visitSBend3D(), visitScalingFFAMagnet(), visitVariableRFCavity(), and visitVerticalFFAMagnet().

std::vector<std::unique_ptr<std::ofstream> > ParallelCyclotronTracker::outfTheta_m

private

output coordinates at different azimuthal angles and one after every turn

Definition at line 312 of file ParallelCyclotronTracker.h.

Referenced by closeFiles(), dumpAzimuthAngles_m(), dumpThetaEachTurn_m(), and openFiles().

std::ofstream ParallelCyclotronTracker::outfTrackOrbit_m

private

output file for six dimensional phase space

Definition at line 320 of file ParallelCyclotronTracker.h.

Referenced by finalizeTracking_m(), initTrackOrbitFile(), seoMode_m(), singleMode_m(), and singleParticleDump().

double ParallelCyclotronTracker::pathLength_m

private

Definition at line 269 of file ParallelCyclotronTracker.h.

Referenced by initDistInGlobalFrame(), and updatePathLength().

std::vector<PluginElement*> ParallelCyclotronTracker::pluginElements_m

private

Definition at line 223 of file ParallelCyclotronTracker.h.

Referenced by applyPluginElements(), execute(), and update_m().

IpplTimings::TimerRef ParallelCyclotronTracker::PluginElemTimer_m

private

Definition at line 338 of file ParallelCyclotronTracker.h.

Referenced by applyPluginElements(), and ParallelCyclotronTracker().

double ParallelCyclotronTracker::prevAzimuth_m

private

Definition at line 287 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpStatData(), execute(), and saveInjectValues().

bool ParallelCyclotronTracker::previousH5Local

private

Definition at line 258 of file ParallelCyclotronTracker.h.

Referenced by setPreviousH5Local(), and visitCyclotron().

Vector_t ParallelCyclotronTracker::PreviousMeanP

private

Definition at line 256 of file ParallelCyclotronTracker.h.

Referenced by bunchMode_m(), and computeSpaceChargeFields_m().

double ParallelCyclotronTracker::referencePhi

private

Definition at line 252 of file ParallelCyclotronTracker.h.

Referenced by initDistInGlobalFrame(), setPhi(), and visitCyclotron().

double ParallelCyclotronTracker::referencePr

private

Definition at line 246 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), initDistInGlobalFrame(), setPr(), visitCyclotron(), and visitRing().

double ParallelCyclotronTracker::referencePsi

private

Definition at line 251 of file ParallelCyclotronTracker.h.

Referenced by initDistInGlobalFrame(), setPsi(), and visitCyclotron().

double ParallelCyclotronTracker::referencePt

private

Definition at line 247 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), initDistInGlobalFrame(), setPt(), visitCyclotron(), and visitRing().

double ParallelCyclotronTracker::referencePtot

private

Definition at line 249 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), visitCyclotron(), and visitRing().

double ParallelCyclotronTracker::referencePz = 0.0

private

Definition at line 248 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), initDistInGlobalFrame(), setPz(), visitCyclotron(), and visitRing().

double ParallelCyclotronTracker::referenceR

private

Definition at line 242 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), initDistInGlobalFrame(), setR(), visitCyclotron(), and visitRing().

double ParallelCyclotronTracker::referenceTheta

private

Definition at line 243 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), initDistInGlobalFrame(), initializeTracking_m(), setTheta(), visitCyclotron(), and visitRing().

double ParallelCyclotronTracker::referenceZ = 0.0

private

Definition at line 244 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), initDistInGlobalFrame(), setZ(), visitCyclotron(), and visitRing().

long long ParallelCyclotronTracker::restartStep0_m

private

Definition at line 281 of file ParallelCyclotronTracker.h.

Referenced by execute(), and initializeTracking_m().

struct ParallelCyclotronTracker::settings ParallelCyclotronTracker::setup_m

private

Referenced by bunchMode_m(), dumpAzimuthAngles_m(), initializeTracking_m(), injectBunch(), and isTurnDone().

double ParallelCyclotronTracker::sinRefTheta_m

private

Definition at line 260 of file ParallelCyclotronTracker.h.

Referenced by initDistInGlobalFrame(), visitCyclotron(), and visitRing().

bool ParallelCyclotronTracker::spiral_flag = false

private

Definition at line 254 of file ParallelCyclotronTracker.h.

Referenced by computeSpaceChargeFields_m(), initializeTracking_m(), and visitCyclotron().

long long ParallelCyclotronTracker::step_m

private

Definition at line 280 of file ParallelCyclotronTracker.h.

Referenced by bunchDumpPhaseSpaceData(), bunchMode_m(), computeSpaceChargeFields_m(), deleteParticle(), execute(), GenericTracker(), initDistInGlobalFrame(), initializeTracking_m(), injectBunch(), isTurnDone(), MtsTracker(), repartition(), seoMode_m(), singleMode_m(), and update_m().

stepper::INTEGRATOR ParallelCyclotronTracker::stepper_m

private

Definition at line 469 of file ParallelCyclotronTracker.h.

Referenced by execute(), and ParallelCyclotronTracker().

IpplTimings::TimerRef ParallelCyclotronTracker::TransformTimer_m

private

Definition at line 336 of file ParallelCyclotronTracker.h.

Referenced by globalToLocal(), localToGlobal(), and ParallelCyclotronTracker().

int ParallelCyclotronTracker::turnnumber_m

private

Definition at line 283 of file ParallelCyclotronTracker.h.

Referenced by applyPluginElements(), bgf_main_collision_test(), bunchMode_m(), dumpAngle(), dumpAzimuthAngles_m(), dumpThetaEachTurn_m(), execute(), finalizeTracking_m(), initializeTracking_m(), injectBunch(), MtsTracker(), and seoMode_m().

Vector_t const ParallelCyclotronTracker::xaxis = Vector_t(1.0, 0.0, 0.0)

staticprivate

The positive axes unit vectors.

Definition at line 236 of file ParallelCyclotronTracker.h.

Referenced by getQuaternionTwoVectors().

Vector_t const ParallelCyclotronTracker::yaxis = Vector_t(0.0, 1.0, 0.0)

staticprivate

Definition at line 237 of file ParallelCyclotronTracker.h.

Referenced by computeSpaceChargeFields_m().

Vector_t const ParallelCyclotronTracker::zaxis = Vector_t(0.0, 0.0, 1.0)

staticprivate

Definition at line 238 of file ParallelCyclotronTracker.h.

Referenced by getQuaternionTwoVectors().

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The documentation for this class was generated from the following files:

• src/Algorithms/ParallelCyclotronTracker.h
• src/Algorithms/ParallelCyclotronTracker.cpp