#include <BoundaryGeometry.h>

Inheritance diagram for BoundaryGeometry:

Collaboration diagram for BoundaryGeometry:

Public Types
enum	DebugFlags { debug_isInside = 0x0001, debug_fastIsInside = 0x0002, debug_intersectRayBoundary = 0x0004, debug_intersectLineSegmentBoundary = 0x0008, debug_intersectTinyLineSegmentBoundary = 0x0010, debug_PartInside = 0x0020 }

Public Member Functions
	BoundaryGeometry ()

virtual	~BoundaryGeometry ()

virtual bool	canReplaceBy (Object *object)
	Test if replacement is allowed. More...

virtual BoundaryGeometry *	clone (const std::string &name)
	Return a clone. More...

virtual void	execute ()
	Execute the command. More...

virtual void	update ()
	Update this object. More...

void	updateElement (ElementBase *element)

void	initialize ()

void	createParticlesOnSurface (size_t n, double darkinward, OpalBeamline &itsOpalBeamline, PartBunchBase< double, 3 > *itsBunch)

void	createPriPart (size_t n, double darkinward, OpalBeamline &itsOpalBeamline, PartBunchBase< double, 3 > *itsBunch)

int	partInside (const Vector_t &r, const Vector_t &v, const double dt, int Parttype, const double Qloss, Vector_t &intecoords, int &triId)

int	emitSecondaryNone (const Vector_t &intecoords, const int &triId)

int	emitSecondaryFurmanPivi (const Vector_t &intecoords, const int i, PartBunchBase< double, 3 > *itsBunch, double &seyNum)

int	emitSecondaryVaughan (const Vector_t &intecoords, const int i, PartBunchBase< double, 3 > *itsBunch, double &seyNum)

Inform &	printInfo (Inform &os) const

void	writeGeomToVtk (std::string fn)

std::string	getFilename () const

std::string	getTopology () const

std::string	getDistribution ()

std::vector< std::string >	getDistributionArray ()

size_t	getN ()

Vector_t	getCooridinate (size_t i)

void	clearCooridinateArray ()

Vector_t	getMomenta (size_t i)

void	clearMomentaArray ()

double	getA ()

double	getB ()

double	getC ()

double	getS ()

double	getLength ()

double	getL1 ()

double	getL2 ()

void	setNEmissionMode (bool nEmissionMode)

void	setWorkFunction (double workFunction)

void	setFieldEnhancement (double fieldEnhancement)

void	setMaxFN (size_t maxFNemission)

void	setFNTreshold (double fieldFNthreshold)

void	setFNParameterA (double parameterFNA)

void	setFNParameterB (double parameterFNB)

void	setFNParameterY (double parameterFNY)

void	setFNParameterVYZe (double parameterFNVYZe)

void	setFNParameterVYSe (double parameterFNVYSe)

void	setBoundaryMatType (int BoundaryMatType)

void	setEInitThreshold (double einitthreshold)

void	setvSeyZero (double vSeyZero)

void	setvEZero (double vEZero)

void	setvSeyMax (double vSeyMax)

void	setvEmax (double vEmax)

void	setvKenergy (double vKenergy)

void	setvKtheta (double vKtheta)

void	setvVThermal (double vVThermal)

void	setVw (double ppVw)

size_t	getNumBFaces ()

Vector_t	gethr ()

Vektor< int, 3 >	getnr ()

Vector_t	getmincoords ()

Vector_t	getmaxcoords ()

bool	isOutsideApperture (Vector_t x)

int	intersectRayBoundary (const Vector_t &P, const Vector_t &v, Vector_t &I)

int	fastIsInside (const Vector_t &reference_pt, const Vector_t &P)

void	enableDebug (enum DebugFlags flags)

void	disableDebug (enum DebugFlags flags)

Public Member Functions inherited from Definition
virtual	~Definition ()

virtual const std::string	getCategory () const
	Return the object category as a string. More...

virtual bool	shouldTrace () const
	Trace flag. More...

virtual bool	shouldUpdate () const
	Update flag. More...

Public Member Functions inherited from Object
virtual	~Object ()

void	copyAttributes (const Object &)
	Copy attributes from another object. More...

virtual Attribute *	findAttribute (const std::string &name)
	Find an attribute by name. More...

virtual const Attribute *	findAttribute (const std::string &name) const
	Find an attribute by name. More...

virtual Object *	makeTemplate (const std::string &, TokenStream &, Statement &)
	Macro handler function. More...

virtual Object *	makeInstance (const std::string &name, Statement &, const Parser *)
	Macro handler function. More...

virtual void	parse (Statement &)
	Parse the object. More...

virtual void	parseShortcut (Statement &)
	Parser for single-attribute commands. More...

virtual void	print (std::ostream &) const
	Print the object. More...

virtual void	printValue (std::ostream &) const

virtual void	printHelp (std::ostream &) const
	Print help. More...

virtual void	replace (Object oldObject, Object newObject)
	Replace references. More...

bool	isBuiltin () const
	True, if [b]this[/b] is a built-in object. More...

virtual bool	isShared () const
	Shared flag. More...

virtual void	setShared (bool)
	Set/reset shared flag. More...

void	setDirty (bool)
	Set/reset the [b]modified[/b] flag. More...

bool	isDirty () const
	True, if the [b]modified[/b] flag is set. More...

void	setFlag (bool)
	Flag/unflag this object, e. g. to control output of objects for. More...

bool	isFlagged () const
	True, if [b]this[/b] is flagged by setFlag(true). More...

const Object *	getBaseObject () const
	Return the object's base type object. More...

const std::string &	getOpalName () const
	Return object name. More...

Object *	getParent () const
	Return parent pointer. More...

bool	isTreeMember (const Object *subTree) const
	Test for tree membership. More...

void	setOpalName (const std::string &name)
	Set object name. More...

void	setParent (Object *)
	Set parent object. More...

void	clear ()
	Clear the occurrence counter. More...

int	increment ()
	Increment and return the occurrence counter. More...

int	occurrenceCount ()
	Return the occurrence counter. More...

void	registerReference (Invalidator *a)
	Register a reference to this object. More...

void	unregisterReference (Invalidator *a)
	Unegister a reference to this object. More...

void	registerOwnership (const AttributeHandler::OwnerType &itsClass) const

Public Member Functions inherited from RCObject
int	addReference () const
	Increment reference count. More...

int	removeReference () const
	Decrement the reference count. More...

bool	isShared () const
	Test for sharing. More...

Static Public Member Functions
static BoundaryGeometry *	find (const std::string &name)

Public Attributes
std::vector< Vector_t >	TriBarycenters_m

std::vector< double >	TriPrPartloss_m

std::vector< double >	TriSePartloss_m

std::vector< double >	TriFEPartloss_m

std::vector< short >	TriBGphysicstag_m

Vector_t	minExtent

Vector_t	maxExtent

Vector_t	sizeOfVoxel

Vektor< int, 3 >	nr_m

std::unordered_map< int, std::unordered_set< int > >	ids

Public Attributes inherited from Object
std::vector< Attribute >	itsAttr
	The object attributes (see Attribute.hh). More...

Private Types
enum	INTERSECTION_TESTS { SEGMENT, RAY, LINE }

enum	{ FGEOM, LENGTH, S, L1, L2, A, B, C, TOPO, DISTR, DISTRS, ZSHIFT, XYZSCALE, XSCALE, YSCALE, ZSCALE, APERTURE, SIZE }

Private Member Functions
int	intersectTriangleVoxel (const int triangle_id, const int i, const int j, const int k)

int	intersectTinyLineSegmentBoundary (const Vector_t &, const Vector_t &, Vector_t &, int &)

int	intersectLineSegmentBoundary (const Vector_t &P0, const Vector_t &P1, Vector_t &intersection_pt, int &triangle_id)

	BoundaryGeometry (const BoundaryGeometry &)

void	operator= (const BoundaryGeometry &)

	BoundaryGeometry (const std::string &name, BoundaryGeometry *parent)

bool	hasApperture ()

const Vector_t &	getPoint (const int triangle_id, const int vertex_id)

int	intersectLineTriangle (const enum INTERSECTION_TESTS kind, const Vector_t &P0, const Vector_t &P1, const int triangle_id, Vector_t &I)

int	mapVoxelIndices2ID (const int i, const int j, const int k)

Vector_t	mapIndices2Voxel (const int, const int, const int)

Vector_t	mapPoint2Voxel (const Vector_t &)

void	computeMeshVoxelization (void)

Private Attributes
std::string	h5FileName_m

std::vector< Vector_t >	Points_m

std::vector< std::array < unsigned int, 4 > >	Triangles_m

std::vector< Vector_t >	TriNormals_m

std::vector< double >	TriAreas_m

Vector_t	minExtent_m

Vector_t	maxExtent_m

struct {
Vector_t minExtent

Vector_t maxExtent

Vector_t sizeOfVoxel

Vektor< int, 3 > nr_m

std::unordered_map< int, std::unordered_set< int > > ids

}	voxelMesh_m

int	debugFlags_m

std::vector< Vector_t >	partsp_m

std::vector< Vector_t >	partsr_m

std::vector< double >	apert_m

SecondaryEmissionPhysics	sec_phys_m

bool	nEmissionMode_m

double	eInitThreshold_m

double	vSeyZero_m

double	vEzero_m

double	vSeyMax_m

double	vEmax_m

double	vKenergy_m

double	vKtheta_m

double	vVThermal_m

double	ppVw_m

int	seBoundaryMatType_m

double	workFunction_m

double	fieldEnhancement_m

size_t	maxFNemission_m

double	fieldFNthreshold_m

double	parameterFNA_m

double	parameterFNB_m

double	parameterFNY_m

double	parameterFNVYZe_m

double	parameterFNVYSe_m

gsl_rng *	randGen_m

IpplTimings::TimerRef	Tinitialize_m

IpplTimings::TimerRef	TisInside_m

IpplTimings::TimerRef	TfastIsInside_m

IpplTimings::TimerRef	TRayTrace_m

IpplTimings::TimerRef	TPartInside_m

Additional Inherited Members
Protected Member Functions inherited from Definition
	Definition (int size, const char name, const char help)
	Constructor for exemplars. More...

	Definition (const std::string &name, Definition *parent)
	Constructor for clones. More...

Protected Member Functions inherited from Object
	Object (int size, const char name, const char help)
	Constructor for exemplars. More...

	Object (const std::string &name, Object *parent)
	Constructor for clones. More...

Protected Member Functions inherited from RCObject
	RCObject ()
	Default constructor. More...

	RCObject (const RCObject &)
	Copy constructor. More...

virtual	~RCObject ()=0

RCObject &	operator= (const RCObject &right)

Protected Attributes inherited from Object
bool	builtin
	Built-in flag. More...

bool	modified
	Dirty flag. More...

bool	flagged
	Object flag. More...

Detailed Description

Definition at line 47 of file BoundaryGeometry.h.

Member Enumeration Documentation

anonymous enum

private

Enumerator
FGEOM
LENGTH
S
L1
L2
A
B
C
TOPO
DISTR
DISTRS
ZSHIFT
XYZSCALE
XSCALE
YSCALE
ZSCALE
APERTURE
SIZE

Definition at line 497 of file BoundaryGeometry.h.

enum BoundaryGeometry::DebugFlags

Enumerator
debug_isInside
debug_fastIsInside
debug_intersectRayBoundary
debug_intersectLineSegmentBoundary
debug_intersectTinyLineSegmentBoundary
debug_PartInside

Definition at line 356 of file BoundaryGeometry.h.

enum BoundaryGeometry::INTERSECTION_TESTS

private

Enumerator
SEGMENT
RAY
LINE

Definition at line 479 of file BoundaryGeometry.h.

Constructor & Destructor Documentation

BoundaryGeometry::BoundaryGeometry ( )

Definition at line 697 of file BoundaryGeometry.cpp.

References A, APERTURE, B, Object::builtin, C, clone(), OpalData::define(), DISTR, DISTRS, FGEOM, OpalData::getInstance(), Attributes::getString(), IpplTimings::getTimer(), h5FileName_m, initialize(), Object::itsAttr, L1, L2, LENGTH, Attributes::makeReal(), Attributes::makeRealArray(), Attributes::makeString(), Attributes::makeStringArray(), randGen_m, Object::registerOwnership(), S, AttributeHandler::STATEMENT, TfastIsInside_m, Tinitialize_m, TisInside_m, TOPO, TPartInside_m, TRayTrace_m, update(), XSCALE, XYZSCALE, YSCALE, ZSCALE, and ZSHIFT.

Referenced by clone().

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BoundaryGeometry::~BoundaryGeometry ( )

virtual

Definition at line 826 of file BoundaryGeometry.cpp.

References randGen_m.

BoundaryGeometry::BoundaryGeometry ( const BoundaryGeometry & )

private

BoundaryGeometry::BoundaryGeometry	(	const std::string &	name,
		BoundaryGeometry *	parent
	)

private

Definition at line 808 of file BoundaryGeometry.cpp.

References FGEOM, Attributes::getString(), IpplTimings::getTimer(), h5FileName_m, initialize(), Object::itsAttr, randGen_m, TfastIsInside_m, Tinitialize_m, TisInside_m, TPartInside_m, and TRayTrace_m.

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Member Function Documentation

bool BoundaryGeometry::canReplaceBy ( Object * object )

virtual

Test if replacement is allowed.

Reimplemented from Object.

Definition at line 830 of file BoundaryGeometry.cpp.

void BoundaryGeometry::clearCooridinateArray ( )

inline

Definition at line 140 of file BoundaryGeometry.h.

References partsr_m.

Referenced by Distribution::createBoundaryGeometry(), and Distribution::createPriPart().

void BoundaryGeometry::clearMomentaArray ( )

inline

Definition at line 147 of file BoundaryGeometry.h.

References partsp_m.

Referenced by Distribution::createPriPart().

BoundaryGeometry * BoundaryGeometry::clone ( const std::string & name )

virtual

Return a clone.

Implements Object.

Definition at line 835 of file BoundaryGeometry.cpp.

References BoundaryGeometry().

Referenced by BoundaryGeometry().

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void BoundaryGeometry::computeMeshVoxelization ( void )

inlineprivate

Definition at line 1180 of file BoundaryGeometry.cpp.

References endl(), getPoint(), INSIDE, intersectTriangleVoxel(), mapPoint2VoxelIndices, mapVoxelIndices2ID(), MAX3, MIN3, IpplInfo::myNode(), Triangles_m, and voxelMesh_m.

Referenced by initialize().

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void BoundaryGeometry::createParticlesOnSurface	(	size_t	n,
		double	darkinward,
		OpalBeamline &	itsOpalBeamline,
		PartBunchBase< double, 3 > *	itsBunch
	)

Initialize some darkcurrent particles near the surface with inward momenta.

Definition at line 2240 of file BoundaryGeometry.cpp.

References BGphysics::Absorption, B, Communicate::broadcast_all(), IpplInfo::Comm, eInitThreshold_m, fabs(), BGphysics::FNEmission, PartBunchBase< T, Dim >::getdT(), OpalBeamline::getFieldAt(), getMessage(), IpplRandom, IpplInfo::myNode(), Hypervolume::n, partsr_m, putMessage(), Communicate::receive_block(), BGphysics::SecondaryEmission, Triangles_m, TriBarycenters_m, TriBGphysicstag_m, and TriNormals_m.

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void BoundaryGeometry::createPriPart	(	size_t	n,
		double	darkinward,
		OpalBeamline &	itsOpalBeamline,
		PartBunchBase< double, 3 > *	itsBunch
	)

Initialize primary particles near the surface with inward momenta.

Definition at line 2295 of file BoundaryGeometry.cpp.

References BGphysics::Absorption, B, Communicate::broadcast_all(), IpplInfo::Comm, eInitThreshold_m, fabs(), BGphysics::FNEmission, PartBunchBase< T, Dim >::getdT(), OpalBeamline::getFieldAt(), getMessage(), IpplRandom, maxExtent_m, minExtent_m, IpplInfo::myNode(), Hypervolume::n, partsp_m, partsr_m, Options::ppdebug, putMessage(), Communicate::receive_block(), BGphysics::SecondaryEmission, Triangles_m, TriBarycenters_m, TriBGphysicstag_m, and TriNormals_m.

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void BoundaryGeometry::disableDebug ( enum DebugFlags flags )

inline

Definition at line 369 of file BoundaryGeometry.h.

References debugFlags_m.

int BoundaryGeometry::emitSecondaryFurmanPivi	(	const Vector_t &	intecoords,
		const int	i,
		PartBunchBase< double, 3 > *	itsBunch,
		double &	seyNum
	)

Determine physical behaviour when particle hits the boundary triangle, call Furman-Pivi's secondary emission model.

Definition at line 2104 of file BoundaryGeometry.cpp.

References BGphysics::Absorption, dot(), endl(), ERRORMSG, BGphysics::FNEmission, getPoint(), Physics::m_e, nEmissionMode_m, BGphysics::Nop, SecondaryEmissionPhysics::nSec(), PartBunchBase< T, Dim >::P, ppVw_m, PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::R, seBoundaryMatType_m, sec_phys_m, BGphysics::SecondaryEmission, sqrt(), TriBGphysicstag_m, PartBunchBase< T, Dim >::TriID, TriNormals_m, and vVThermal_m.

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int BoundaryGeometry::emitSecondaryNone	(	const Vector_t &	intecoords,
		const int &	triId
	)

Determine physical behaviour when particle hits the boundary triangle, non secondary emission version.

Definition at line 2085 of file BoundaryGeometry.cpp.

References BGphysics::Absorption, BGphysics::FNEmission, BGphysics::Nop, and TriBGphysicstag_m.

int BoundaryGeometry::emitSecondaryVaughan	(	const Vector_t &	intecoords,
		const int	i,
		PartBunchBase< double, 3 > *	itsBunch,
		double &	seyNum
	)

Determine physical behaviour when particle hits the boundary triangle, call Vaughan's secondary emission model.

Definition at line 2168 of file BoundaryGeometry.cpp.

References BGphysics::Absorption, dot(), endl(), ERRORMSG, BGphysics::FNEmission, getPoint(), Physics::m_e, nEmissionMode_m, BGphysics::Nop, SecondaryEmissionPhysics::nSec(), PartBunchBase< T, Dim >::P, ppVw_m, PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::R, sec_phys_m, BGphysics::SecondaryEmission, sqrt(), TriBGphysicstag_m, PartBunchBase< T, Dim >::TriID, TriNormals_m, vEmax_m, vEzero_m, vKenergy_m, vKtheta_m, vSeyMax_m, vSeyZero_m, and vVThermal_m.

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void BoundaryGeometry::enableDebug ( enum DebugFlags flags )

inline

Definition at line 365 of file BoundaryGeometry.h.

References debugFlags_m.

void BoundaryGeometry::execute ( )

virtual

Execute the command.

Reimplemented from Object.

Definition at line 844 of file BoundaryGeometry.cpp.

References IpplTimings::getTimer(), TfastIsInside_m, Tinitialize_m, TisInside_m, TPartInside_m, TRayTrace_m, and update().

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int BoundaryGeometry::fastIsInside	(	const Vector_t &	reference_pt,
		const Vector_t &	P
	)

Definition at line 1022 of file BoundaryGeometry.cpp.

References Physics::c, ceil(), debug_fastIsInside, debug_intersectTinyLineSegmentBoundary, debugFlags_m, endl(), intersectTinyLineSegmentBoundary(), Voxel::isInside(), maxExtent_m, MIN3, minExtent_m, IpplTimings::startTimer(), IpplTimings::stopTimer(), TfastIsInside_m, and voxelMesh_m.

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BoundaryGeometry * BoundaryGeometry::find ( const std::string & name )

static

Definition at line 853 of file BoundaryGeometry.cpp.

References OpalData::find(), and OpalData::getInstance().

Referenced by FieldSolver::initSolver(), TrackRun::setupCyclotronTracker(), TrackRun::setupThickTracker(), TrackRun::setupTTracker(), OpalDrift::update(), OpalParallelPlate::update(), OpalCavity::update(), and OpalCyclotron::update().

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double BoundaryGeometry::getA ( )

inline

Definition at line 151 of file BoundaryGeometry.h.

References A, Attributes::getReal(), and Object::itsAttr.

Referenced by FieldSolver::initSolver().

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double BoundaryGeometry::getB ( )

inline

Definition at line 155 of file BoundaryGeometry.h.

References B, Attributes::getReal(), and Object::itsAttr.

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double BoundaryGeometry::getC ( )

inline

Definition at line 159 of file BoundaryGeometry.h.

References C, Attributes::getReal(), and Object::itsAttr.

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Vector_t BoundaryGeometry::getCooridinate ( size_t i )

inline

Definition at line 137 of file BoundaryGeometry.h.

References partsr_m.

Referenced by Distribution::createBoundaryGeometry(), and Distribution::createPriPart().

std::string BoundaryGeometry::getDistribution ( )

inline

Definition at line 125 of file BoundaryGeometry.h.

References DISTR, Attributes::getString(), and Object::itsAttr.

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std::vector<std::string> BoundaryGeometry::getDistributionArray ( )

inline

Definition at line 129 of file BoundaryGeometry.h.

References DISTRS, Attributes::getStringArray(), and Object::itsAttr.

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std::string BoundaryGeometry::getFilename ( ) const

inline

Definition at line 117 of file BoundaryGeometry.h.

References FGEOM, Attributes::getString(), and Object::itsAttr.

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Vector_t BoundaryGeometry::gethr ( )

inline

Return the hr_m.

Definition at line 279 of file BoundaryGeometry.h.

References voxelMesh_m.

Referenced by DataSink::writePartlossZASCII().

double BoundaryGeometry::getL1 ( )

inline

Definition at line 171 of file BoundaryGeometry.h.

References Attributes::getReal(), Object::itsAttr, and L1.

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double BoundaryGeometry::getL2 ( )

inline

Definition at line 175 of file BoundaryGeometry.h.

References Attributes::getReal(), Object::itsAttr, and L2.

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double BoundaryGeometry::getLength ( )

inline

Definition at line 167 of file BoundaryGeometry.h.

References Attributes::getReal(), Object::itsAttr, and LENGTH.

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Vector_t BoundaryGeometry::getmaxcoords ( )

inline

Return the maxcoords_m.

Definition at line 298 of file BoundaryGeometry.h.

References maxExtent_m.

Vector_t BoundaryGeometry::getmincoords ( )

inline

Return the mincoords_m.

Definition at line 292 of file BoundaryGeometry.h.

References minExtent_m.

Referenced by DataSink::writePartlossZASCII().

Vector_t BoundaryGeometry::getMomenta ( size_t i )

inline

Definition at line 143 of file BoundaryGeometry.h.

References partsp_m.

Referenced by Distribution::createPriPart().

size_t BoundaryGeometry::getN ( )

inline

Definition at line 133 of file BoundaryGeometry.h.

References partsr_m.

Referenced by Distribution::createBoundaryGeometry(), and Distribution::createPriPart().

Vektor<int, 3> BoundaryGeometry::getnr ( )

inline

Return the nr_m.

Definition at line 285 of file BoundaryGeometry.h.

References voxelMesh_m.

Referenced by DataSink::writePartlossZASCII().

size_t BoundaryGeometry::getNumBFaces ( )

inline

Return number of boundary faces.

Definition at line 272 of file BoundaryGeometry.h.

References Triangles_m.

Referenced by DataSink::writePartlossZASCII().

const Vector_t& BoundaryGeometry::getPoint	(	const int	triangle_id,
		const int	vertex_id
	)

inlineprivate

Definition at line 474 of file BoundaryGeometry.h.

References Points_m, and Triangles_m.

Referenced by computeMeshVoxelization(), emitSecondaryFurmanPivi(), emitSecondaryVaughan(), initialize(), intersectLineTriangle(), intersectTinyLineSegmentBoundary(), and intersectTriangleVoxel().

double BoundaryGeometry::getS ( )

inline

Definition at line 163 of file BoundaryGeometry.h.

References Attributes::getReal(), Object::itsAttr, and S.

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std::string BoundaryGeometry::getTopology ( ) const

inline

Definition at line 121 of file BoundaryGeometry.h.

References Attributes::getString(), Object::itsAttr, and TOPO.

Referenced by printInfo().

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bool BoundaryGeometry::hasApperture ( )

inlineprivate

Definition at line 470 of file BoundaryGeometry.h.

References apert_m.

Referenced by initialize(), and isOutsideApperture().

void BoundaryGeometry::initialize ( )

Definition at line 1220 of file BoundaryGeometry.cpp.

References BGphysics::Absorption, apert_m, APERTURE, Communicate::barrier(), C, IpplInfo::Comm, computeMeshVoxelization(), debugFlags_m, dot(), endl(), floor(), BGphysics::FNEmission, IpplInfo::getComm(), getPoint(), Attributes::getReal(), Attributes::getRealArray(), h5FileName_m, hasApperture(), intersectLineTriangle(), Object::itsAttr, max(), maxExtent, maxExtent_m, minExtent, minExtent_m, Hypervolume::n, nr_m, PointID, Points_m, randGen_m, BGphysics::SecondaryEmission, SEGMENT, sizeOfVoxel, SQR, sqrt(), IpplTimings::startTimer(), IpplTimings::stopTimer(), Tinitialize_m, TisInside_m, Triangles_m, TriAreas_m, TriBarycenters_m, TriBGphysicstag_m, TriFEPartloss_m, TriNormals_m, TriPrPartloss_m, TriSePartloss_m, voxelMesh_m, XSCALE, XYZSCALE, YSCALE, ZSCALE, and ZSHIFT.

Referenced by BoundaryGeometry().

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int BoundaryGeometry::intersectLineSegmentBoundary	(	const Vector_t &	P0,
		const Vector_t &	P1,
		Vector_t &	intersection_pt,
		int &	triangle_id
	)

private

Definition at line 1875 of file BoundaryGeometry.cpp.

References debug_intersectLineSegmentBoundary, debug_intersectTinyLineSegmentBoundary, debugFlags_m, endl(), intersectTinyLineSegmentBoundary(), mapPoint2VoxelIndices, MAX2, MIN2, and Hypervolume::n.

Referenced by intersectRayBoundary().

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int BoundaryGeometry::intersectLineTriangle	(	const enum INTERSECTION_TESTS	kind,
		const Vector_t &	P0,
		const Vector_t &	P1,
		const int	triangle_id,
		Vector_t &	I
	)

private

Definition at line 930 of file BoundaryGeometry.cpp.

References cross(), dot(), EPS, getPoint(), LINE, Hypervolume::n, RAY, and SEGMENT.

Referenced by initialize(), and intersectTinyLineSegmentBoundary().

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int BoundaryGeometry::intersectRayBoundary	(	const Vector_t &	P,
		const Vector_t &	v,
		Vector_t &	I
	)

Definition at line 1073 of file BoundaryGeometry.cpp.

References Physics::c, debug_intersectLineSegmentBoundary, debug_intersectRayBoundary, debugFlags_m, endl(), Voxel::intersect(), intersectLineSegmentBoundary(), IpplTimings::startTimer(), IpplTimings::stopTimer(), TRayTrace_m, and voxelMesh_m.

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int BoundaryGeometry::intersectTinyLineSegmentBoundary	(	const Vector_t &	P,
		const Vector_t &	Q,
		Vector_t &	intersect_pt,
		int &	triangle_id
	)

private

Definition at line 1723 of file BoundaryGeometry.cpp.

References debug_intersectTinyLineSegmentBoundary, debugFlags_m, endl(), EPS, getPoint(), Voxel::intersect(), intersectLineTriangle(), LINE, mapIndices2Voxel(), mapPoint2VoxelIndices, mapVoxelIndices2ID(), MAX2, MIN2, Voxel::pts, and voxelMesh_m.

Referenced by fastIsInside(), intersectLineSegmentBoundary(), and partInside().

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int BoundaryGeometry::intersectTriangleVoxel	(	const int	triangle_id,
		const int	i,
		const int	j,
		const int	k
	)

private

Definition at line 867 of file BoundaryGeometry.cpp.

References getPoint(), Voxel::intersect(), and voxelMesh_m.

Referenced by computeMeshVoxelization().

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bool BoundaryGeometry::isOutsideApperture ( Vector_t x )

inline

Definition at line 333 of file BoundaryGeometry.h.

References apert_m, and hasApperture().

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Vector_t BoundaryGeometry::mapIndices2Voxel	(	const int	i,
		const int	j,
		const int	k
	)

inlineprivate

Definition at line 1156 of file BoundaryGeometry.cpp.

References voxelMesh_m.

Referenced by intersectTinyLineSegmentBoundary(), and mapPoint2Voxel().

Vector_t BoundaryGeometry::mapPoint2Voxel ( const Vector_t & pt )

inlineprivate

Definition at line 1168 of file BoundaryGeometry.cpp.

References floor(), mapIndices2Voxel(), and voxelMesh_m.

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int BoundaryGeometry::mapVoxelIndices2ID	(	const int	i,
		const int	j,
		const int	k
	)

inlineprivate

Definition at line 1125 of file BoundaryGeometry.cpp.

References voxelMesh_m.

Referenced by computeMeshVoxelization(), and intersectTinyLineSegmentBoundary().

void BoundaryGeometry::operator= ( const BoundaryGeometry & )

private

int BoundaryGeometry::partInside	(	const Vector_t &	r,
		const Vector_t &	v,
		const double	dt,
		int	Parttype,
		const double	Qloss,
		Vector_t &	intersect_pt,
		int &	triangle_id
	)

Determine whether a particle with position

Parameters

r,momenta
v,and	time step
dt	will hit the boundary.

return value: -1 no collison with boundary 0 particle will collide with boundary in next time step

Definition at line 1944 of file BoundaryGeometry.cpp.

References Physics::c, debug_intersectTinyLineSegmentBoundary, debug_PartInside, debugFlags_m, dot(), endl(), intersectTinyLineSegmentBoundary(), sqrt(), IpplTimings::startTimer(), IpplTimings::stopTimer(), TPartInside_m, TriFEPartloss_m, TriPrPartloss_m, and TriSePartloss_m.

Referenced by ParallelCyclotronTracker::bgf_main_collision_test().

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Inform & BoundaryGeometry::printInfo ( Inform & os ) const

Definition at line 2042 of file BoundaryGeometry.cpp.

References endl(), FGEOM, Object::getOpalName(), Attributes::getReal(), Attributes::getString(), getTopology(), Object::itsAttr, L1, L2, LENGTH, maxExtent_m, minExtent_m, Points_m, S, TOPO, Triangles_m, and voxelMesh_m.

Referenced by operator<<().

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void BoundaryGeometry::setBoundaryMatType ( int BoundaryMatType )

inline

Definition at line 219 of file BoundaryGeometry.h.

References seBoundaryMatType_m.

void BoundaryGeometry::setEInitThreshold ( double einitthreshold )

inline

Definition at line 223 of file BoundaryGeometry.h.

References eInitThreshold_m.

void BoundaryGeometry::setFieldEnhancement ( double fieldEnhancement )

inline

Definition at line 187 of file BoundaryGeometry.h.

References fieldEnhancement_m.

void BoundaryGeometry::setFNParameterA ( double parameterFNA )

inline

Definition at line 199 of file BoundaryGeometry.h.

References parameterFNA_m.

void BoundaryGeometry::setFNParameterB ( double parameterFNB )

inline

Definition at line 203 of file BoundaryGeometry.h.

References parameterFNB_m.

void BoundaryGeometry::setFNParameterVYSe ( double parameterFNVYSe )

inline

Definition at line 215 of file BoundaryGeometry.h.

References parameterFNVYSe_m.

void BoundaryGeometry::setFNParameterVYZe ( double parameterFNVYZe )

inline

Definition at line 211 of file BoundaryGeometry.h.

References parameterFNVYZe_m.

void BoundaryGeometry::setFNParameterY ( double parameterFNY )

inline

Definition at line 207 of file BoundaryGeometry.h.

References parameterFNY_m.

void BoundaryGeometry::setFNTreshold ( double fieldFNthreshold )

inline

Definition at line 195 of file BoundaryGeometry.h.

References fieldFNthreshold_m.

void BoundaryGeometry::setMaxFN ( size_t maxFNemission )

inline

Definition at line 191 of file BoundaryGeometry.h.

References maxFNemission_m.

void BoundaryGeometry::setNEmissionMode ( bool nEmissionMode )

inline

Definition at line 179 of file BoundaryGeometry.h.

References nEmissionMode_m.

void BoundaryGeometry::setvEmax ( double vEmax )

inline

Definition at line 243 of file BoundaryGeometry.h.

References vEmax_m.

void BoundaryGeometry::setvEZero ( double vEZero )

inline

Definition at line 233 of file BoundaryGeometry.h.

References vEzero_m.

void BoundaryGeometry::setvKenergy ( double vKenergy )

inline

Definition at line 249 of file BoundaryGeometry.h.

References vKenergy_m.

void BoundaryGeometry::setvKtheta ( double vKtheta )

inline

Definition at line 255 of file BoundaryGeometry.h.

References vKtheta_m.

void BoundaryGeometry::setvSeyMax ( double vSeyMax )

inline

Definition at line 238 of file BoundaryGeometry.h.

References vSeyMax_m.

void BoundaryGeometry::setvSeyZero ( double vSeyZero )

inline

Definition at line 228 of file BoundaryGeometry.h.

References vSeyZero_m.

void BoundaryGeometry::setvVThermal ( double vVThermal )

inline

Definition at line 261 of file BoundaryGeometry.h.

References vVThermal_m.

void BoundaryGeometry::setVw ( double ppVw )

inline

Definition at line 265 of file BoundaryGeometry.h.

References ppVw_m.

void BoundaryGeometry::setWorkFunction ( double workFunction )

inline

Definition at line 183 of file BoundaryGeometry.h.

References workFunction_m.

void BoundaryGeometry::update ( )

virtual

Update this object.

Reimplemented from Object.

Definition at line 839 of file BoundaryGeometry.cpp.

References Object::getOpalName(), and Object::setOpalName().

Referenced by BoundaryGeometry(), and execute().

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void BoundaryGeometry::updateElement ( ElementBase * element )

Definition at line 863 of file BoundaryGeometry.cpp.

Referenced by ElementBase::ElementBase().

void BoundaryGeometry::writeGeomToVtk ( std::string fn )

Definition at line 2006 of file BoundaryGeometry.cpp.

References endl(), PointID, Points_m, and Triangles_m.

Referenced by DataSink::writeGeomToVtk().

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Member Data Documentation

std::vector<double> BoundaryGeometry::apert_m

private

Definition at line 426 of file BoundaryGeometry.h.

Referenced by hasApperture(), initialize(), and isOutsideApperture().

int BoundaryGeometry::debugFlags_m

private

Definition at line 416 of file BoundaryGeometry.h.

Referenced by disableDebug(), enableDebug(), fastIsInside(), initialize(), intersectLineSegmentBoundary(), intersectRayBoundary(), intersectTinyLineSegmentBoundary(), and partInside().

double BoundaryGeometry::eInitThreshold_m

private

Definition at line 431 of file BoundaryGeometry.h.

Referenced by createParticlesOnSurface(), createPriPart(), and setEInitThreshold().

double BoundaryGeometry::fieldEnhancement_m

private

Definition at line 447 of file BoundaryGeometry.h.

Referenced by setFieldEnhancement().

double BoundaryGeometry::fieldFNthreshold_m

private

Definition at line 449 of file BoundaryGeometry.h.

Referenced by setFNTreshold().

std::string BoundaryGeometry::h5FileName_m

private

Definition at line 394 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), and initialize().

std::unordered_map<int, std::unordered_set<int> > BoundaryGeometry::ids

Definition at line 412 of file BoundaryGeometry.h.

Vector_t BoundaryGeometry::maxExtent

Definition at line 408 of file BoundaryGeometry.h.

Referenced by initialize().

Vector_t BoundaryGeometry::maxExtent_m

private

Definition at line 404 of file BoundaryGeometry.h.

Referenced by createPriPart(), fastIsInside(), getmaxcoords(), initialize(), and printInfo().

size_t BoundaryGeometry::maxFNemission_m

private

Definition at line 448 of file BoundaryGeometry.h.

Referenced by setMaxFN().

Vector_t BoundaryGeometry::minExtent

Definition at line 407 of file BoundaryGeometry.h.

Referenced by initialize().

Vector_t BoundaryGeometry::minExtent_m

private

Definition at line 403 of file BoundaryGeometry.h.

Referenced by createPriPart(), fastIsInside(), getmincoords(), initialize(), and printInfo().

bool BoundaryGeometry::nEmissionMode_m

private

Definition at line 430 of file BoundaryGeometry.h.

Referenced by emitSecondaryFurmanPivi(), emitSecondaryVaughan(), and setNEmissionMode().

Vektor<int, 3> BoundaryGeometry::nr_m

Definition at line 410 of file BoundaryGeometry.h.

Referenced by initialize().

double BoundaryGeometry::parameterFNA_m

private

Definition at line 450 of file BoundaryGeometry.h.

Referenced by setFNParameterA().

double BoundaryGeometry::parameterFNB_m

private

Definition at line 451 of file BoundaryGeometry.h.

Referenced by setFNParameterB().

double BoundaryGeometry::parameterFNVYSe_m

private

Definition at line 454 of file BoundaryGeometry.h.

Referenced by setFNParameterVYSe().

double BoundaryGeometry::parameterFNVYZe_m

private

Definition at line 453 of file BoundaryGeometry.h.

Referenced by setFNParameterVYZe().

double BoundaryGeometry::parameterFNY_m

private

Definition at line 452 of file BoundaryGeometry.h.

Referenced by setFNParameterY().

std::vector<Vector_t> BoundaryGeometry::partsp_m

private

Definition at line 418 of file BoundaryGeometry.h.

Referenced by clearMomentaArray(), createPriPart(), and getMomenta().

std::vector<Vector_t> BoundaryGeometry::partsr_m

private

Definition at line 419 of file BoundaryGeometry.h.

Referenced by clearCooridinateArray(), createParticlesOnSurface(), createPriPart(), getCooridinate(), and getN().

std::vector<Vector_t> BoundaryGeometry::Points_m

private

Definition at line 396 of file BoundaryGeometry.h.

Referenced by getPoint(), initialize(), printInfo(), and writeGeomToVtk().

double BoundaryGeometry::ppVw_m

private

Definition at line 442 of file BoundaryGeometry.h.

Referenced by emitSecondaryFurmanPivi(), emitSecondaryVaughan(), and setVw().

gsl_rng* BoundaryGeometry::randGen_m

private

Definition at line 456 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), initialize(), and ~BoundaryGeometry().

int BoundaryGeometry::seBoundaryMatType_m

private

Definition at line 443 of file BoundaryGeometry.h.

Referenced by emitSecondaryFurmanPivi(), and setBoundaryMatType().

SecondaryEmissionPhysics BoundaryGeometry::sec_phys_m

private

Definition at line 428 of file BoundaryGeometry.h.

Referenced by emitSecondaryFurmanPivi(), and emitSecondaryVaughan().

Vector_t BoundaryGeometry::sizeOfVoxel

Definition at line 409 of file BoundaryGeometry.h.

Referenced by initialize().

IpplTimings::TimerRef BoundaryGeometry::TfastIsInside_m

private

Definition at line 460 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and fastIsInside().

IpplTimings::TimerRef BoundaryGeometry::Tinitialize_m

private

Definition at line 458 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and initialize().

IpplTimings::TimerRef BoundaryGeometry::TisInside_m

private

Definition at line 459 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and initialize().

IpplTimings::TimerRef BoundaryGeometry::TPartInside_m

private

Definition at line 462 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and partInside().

IpplTimings::TimerRef BoundaryGeometry::TRayTrace_m

private

Definition at line 461 of file BoundaryGeometry.h.

Referenced by BoundaryGeometry(), execute(), and intersectRayBoundary().

std::vector<std::array<unsigned int,4> > BoundaryGeometry::Triangles_m

private

Definition at line 397 of file BoundaryGeometry.h.

Referenced by computeMeshVoxelization(), createParticlesOnSurface(), createPriPart(), getNumBFaces(), getPoint(), initialize(), printInfo(), and writeGeomToVtk().

std::vector<double> BoundaryGeometry::TriAreas_m

private

Definition at line 401 of file BoundaryGeometry.h.

Referenced by initialize().

std::vector<Vector_t> BoundaryGeometry::TriBarycenters_m

Parameters

TriBarycenters_m store the coordinates of barycentric points of triangles, The Id number is the same with triangle Id.

Definition at line 306 of file BoundaryGeometry.h.

Referenced by createParticlesOnSurface(), createPriPart(), initialize(), and DataSink::writePartlossZASCII().

std::vector<short> BoundaryGeometry::TriBGphysicstag_m

Parameters

TriBGphysicstag_m store the tags of each boundary triangle for proper physics action.

Definition at line 331 of file BoundaryGeometry.h.

Referenced by createParticlesOnSurface(), createPriPart(), emitSecondaryFurmanPivi(), emitSecondaryNone(), emitSecondaryVaughan(), and initialize().

std::vector<double> BoundaryGeometry::TriFEPartloss_m

Parameters

TriFEPartloss_m store the number of field emission/darkcurrent particles hitting the Id th triangle. The Id number is the same with triangle Id(not vertex ID).

Definition at line 325 of file BoundaryGeometry.h.

Referenced by initialize(), partInside(), and DataSink::writePartlossZASCII().

std::vector<Vector_t> BoundaryGeometry::TriNormals_m

private

Definition at line 400 of file BoundaryGeometry.h.

Referenced by createParticlesOnSurface(), createPriPart(), emitSecondaryFurmanPivi(), emitSecondaryVaughan(), and initialize().

std::vector<double> BoundaryGeometry::TriPrPartloss_m

Parameters

TriPrPartloss_m[i],: cummulative sum of primary particles charge hitting triangle 'i'

Definition at line 312 of file BoundaryGeometry.h.

Referenced by initialize(), partInside(), and DataSink::writePartlossZASCII().

std::vector<double> BoundaryGeometry::TriSePartloss_m