FEMAXX (Finite Element Maxwell Eigensolver): mesh::TetMesh Class Reference

Find all tets in mesh which contain the specified point p. The found tets are returned in "tets". If p is outside the mesh an empty vector is returned. If p is on a shared face/edge/point, "tets" may contain more than one entry.

Referenced by NedelecMesh::eval(), NedelecMesh::eval_curl(), h5_cartesian_sampling(), and is_inside().

void mesh::TetMesh::generateEdges ( )

Generates all edges. This method must be called only after all Tets have been inserted. Updates _edges and _edgeOrientation members of all Tets.

Definition at line 86 of file tetmesh.cpp.

References get_edge(), insertEdge(), tet_begin(), and tet_end().

Referenced by TetMeshBuilder::finalize_coord(), and TetMeshBuilder::finalize_tet().

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void mesh::TetMesh::generateFaces ( )

Generates all faces. This method must be called only after all Tets have been inserted. Updates _faces members of all Tets.

Definition at line 105 of file tetmesh.cpp.

References mesh::Tet::get_face_point_lids(), insertFace(), tet_begin(), and tet_end().

Referenced by TetMeshBuilder::finalize_coord(), and TetMeshBuilder::finalize_tet().

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void mesh::TetMesh::get_bounding_box	(	Vector3 &	center,
		Vector3 &	extent
	)			const

Compute center and extent (halved) of the bounding box of the whole mesh.

Definition at line 275 of file tetmesh.cpp.

References mesh::Point::get_coord(), get_nof_points(), get_point(), mesh::Vector3::make_floor(), and max.

Referenced by construct_octree(), and postprocess::VtkExport::export_eigenfields2().

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Edge * mesh::TetMesh::get_edge ( id_t id ) const

Return Edge object with given id

Definition at line 249 of file tetmesh.cpp.

References _edges.

Referenced by NedelecMesh::generate_sorted_AM(), generateEdges(), mesh::Tet::get_edge(), mesh::Face::get_edge(), NedelecMesh::set_map(), LagrangeMesh::set_map(), setBoundaryOnFace(), and setSymmetryPlaneOnFace().

Face * mesh::TetMesh::get_face ( id_t id ) const

Return Face object with given id

Definition at line 245 of file tetmesh.cpp.

References _faces.

Referenced by NedelecElement2::get_dof_ids(), mesh::Tet::get_face(), insertFace(), setBoundaryOnFace(), and setSymmetryPlaneOnFace().

static TetMesh* mesh::TetMesh::get_instance ( ) [inline, static]

Return pointer to single TetMesh instance.

Definition at line 320 of file tetmesh.h.

References instance_.

Referenced by mesh::Tet::get_mesh(), and mesh::Face::get_mesh().

Materials * mesh::TetMesh::get_materials ( ) const

Sets the material properties (if any)

Definition at line 58 of file tetmesh.cpp.

References _materials.

Referenced by NedelecElement::get_AeMe().

const id_t& mesh::TetMesh::get_nof_edges ( ) const [inline]

Return number of edges

Definition at line 181 of file tetmesh.h.

References _nofEdge.

Referenced by NedelecMesh::gdof(), NedelecMesh::generate_sorted_AM(), NedelecElement2::get_dof_ids(), h5_write_eigenfeield_retrieve_DoF_efficient(), LagrangeMesh::LagrangeMesh(), NedelecMesh::NedelecMesh(), mesh::ParallelTetMesh::set_edge_gids(), NedelecMesh::set_map(), and LagrangeMesh::set_map().

const id_t& mesh::TetMesh::get_nof_faces ( ) const [inline]

Return number of faces

Definition at line 177 of file tetmesh.h.

References _nofFace.

Referenced by h5_write_eigenfeield_retrieve_DoF_efficient(), NedelecMesh::NedelecMesh(), mesh::ParallelTetMesh::set_face_gids(), and NedelecMesh::set_map().

const id_t& mesh::TetMesh::get_nof_points ( ) const [inline]

Return number of points

Definition at line 184 of file tetmesh.h.

References _nofPoint.

Referenced by postprocess::VtkExport::export_mesh(), export_mesh(), LagrangeMesh::gdof(), get_bounding_box(), h5_write_eigenpoint(), LagrangeMesh::LagrangeMesh(), LagrangeMesh::set_map(), mesh::ParallelTetMesh::set_point_ownership(), and vtk_export_eigenfields().

const id_t& mesh::TetMesh::get_nof_tets ( ) const [inline]

Return number of local tets

Definition at line 173 of file tetmesh.h.

References _nofTet.

Referenced by construct_octree(), postprocess::VtkExport::export_mesh(), export_mesh(), mesh::ParallelTetMesh::get_num_global_tets(), h5_write_eigenfield(), h5_write_eigenmesh(), NedelecMesh::set_map(), and vtk_export_eigenfields().

LooseOctree<Tet>* mesh::TetMesh::get_octree ( ) const [inline]

Return pointer to Octree or 0 if it is not constructed.

Definition at line 187 of file tetmesh.h.

References _octree.

Referenced by eval_gap_voltage(), and eval_tangetial_efield().

Point * mesh::TetMesh::get_point ( id_t id ) const

Return Point object with given id

Definition at line 253 of file tetmesh.cpp.

References _points.

Referenced by mesh::Tet::CoordinateMatrix::CoordinateMatrix(), postprocess::VtkExport::export_mesh(), export_mesh(), get_bounding_box(), mesh::Tet::get_corner(), mesh::Face::get_corner(), LagrangeMesh::set_map(), setBoundaryOnFace(), setSymmetryPlaneOnFace(), and vtk_export_eigenfields().

Tet * mesh::TetMesh::get_tet ( id_t id ) const

Return Tet object with given id

Definition at line 241 of file tetmesh.cpp.

References _tets.

Referenced by construct_octree(), postprocess::VtkExport::export_mesh(), export_mesh(), mesh::Face::get_corner_id(), mesh::Face::get_edge_id(), h5_compute_eigenquality(), NedelecMesh::q_factor(), NedelecMesh::set_map(), and vtk_export_eigenfields().

void mesh::TetMesh::initPoint ( int nofPoint ) [virtual]

Reserve space for nofPoint mesh points

Reimplemented in mesh::ParallelTetMesh.

Definition at line 63 of file tetmesh.cpp.

References _nofPoint, and _points.

Referenced by TetMeshBuilder::init_coord(), and mesh::ParallelTetMesh::initPoint().

void mesh::TetMesh::initTet ( int nofTet ) [virtual]

Reserve space for nofTet tets

Reimplemented in mesh::ParallelTetMesh.

Definition at line 68 of file tetmesh.cpp.

References _nofTet, and _tets.

Referenced by TetMeshBuilder::init_tet(), and mesh::ParallelTetMesh::initTet().

id_t mesh::TetMesh::insertEdge	(	id_t	node0,
		id_t	node1
	)

Return id of edge with corners node0, node1. Add a new Edge to the mesh if it has not already been constructed.

Parameters:

	node0	Point id of face corner 0.
	node1	Point id of face corner 1.

Returns:: Id of edge with corners node0, node1.

Definition at line 120 of file tetmesh.cpp.

References _edgeMap, _edges, and _nofEdge.

Referenced by generateEdges().

id_t mesh::TetMesh::insertFace	(	id_t	tet,
		id_t	node0,
		id_t	node1,
		id_t	node2
	)

Return id of face with corners node0, node1, node2. Construct a new Face if it has not already been constructed.

Parameters:

	tet	Id of the Tet for which the Face is inserted.
	node0	Point id of face corner 0.
	node1	Point id of face corner 1.
	node2	Point id of face corner 2.

Returns:: Id of Face with corners node0, node1, node2.

Definition at line 135 of file tetmesh.cpp.

References _faceMap, _faces, _nofFace, get_face(), and mesh::Face::set_tet_id().

Referenced by generateFaces().

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void mesh::TetMesh::insertPoint	(	int	id,
		double	x,
		double	y,
		double	z
	)			`[virtual]`

Add a new point to the mesh

Reimplemented in mesh::ParallelTetMesh.

Definition at line 73 of file tetmesh.cpp.

References _points.

Referenced by mesh::ParallelTetMesh::insertPoint(), and TetMeshBuilder::set_coord().

void mesh::TetMesh::insertTet	(	id_t	global_id,
		id_t	id0,
		id_t	id1,
		id_t	id2,
		id_t	id3,
		id_t	material
	)			`[virtual]`

Inserts a new Tet into the TetMesh. Tet ids are assigned in consecutive order.

Parameters:

	id0	id of the corner 0
	id1	id of the corner 1
	id2	id of the corner 2
	id3	id of the corner 3

Reimplemented in mesh::ParallelTetMesh.

Definition at line 78 of file tetmesh.cpp.

References _tetCounter, and _tets.

Referenced by mesh::ParallelTetMesh::insertTet(), and TetMeshBuilder::set_tet().

bool mesh::TetMesh::is_inside ( const Vector3 & p ) const [inline]

Return true if p is in inside the mesh, i.e. inside at least one tet of the mesh.

Definition at line 236 of file tetmesh.h.

References find_tets_by_point().

Referenced by construct_octree(), find_boundary(), and CometGapFinder::get_gap().

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void mesh::TetMesh::load_materials ( const char * fileName )

Sets the material properties (if any)

Definition at line 54 of file tetmesh.cpp.

References _materials.

Referenced by FemaxxDriver::load_mesh().

void mesh::TetMesh::log_mesh_info ( )

Dump mesh summary info to info channel

Definition at line 257 of file tetmesh.cpp.

References _nofEdge, _nofFace, _nofPoint, _nofSym, _nofTet, and rlog::bytes2str().

Referenced by FemaxxDriver::load_mesh(), and load_mesh().

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id_t mesh::TetMesh::lookupEdge	(	id_t	node0,
		id_t	node1
	)			`[virtual]`

Return edge connecting node0 and node1. A runtime_error is thrown if the edge does not exist.

Definition at line 165 of file tetmesh.cpp.

References _edgeMap.

Referenced by setBoundaryOnFace(), and setSymmetryPlaneOnFace().

id_t mesh::TetMesh::lookupFace	(	id_t	node0,
		id_t	node1,
		id_t	node2
	)			`[virtual]`

Return face connecting by node0, node1 and node2. A runtime_error is thrown if the face does not exist.

Reimplemented in mesh::ParallelTetMesh.

Definition at line 175 of file tetmesh.cpp.

References _faceMap.

Referenced by mesh::ParallelTetMesh::lookupFace(), and TetMeshBuilder::set_bc().

TetMesh& mesh::TetMesh::operator= ( const TetMesh & ) [private]

Assignment operator: private, undefined: disallow assignment

point_iterator mesh::TetMesh::point_begin ( ) [inline]

Return point_iterator pointing to first Point

Definition at line 298 of file tetmesh.h.

References _points.

Referenced by h5_write_eigenpoint(), main(), and mesh::ParallelTetMesh::set_point_ownership().

point_iterator mesh::TetMesh::point_end ( ) [inline]

Return point_iterator pointing beyond last Point

Definition at line 302 of file tetmesh.h.

References _points.

Referenced by h5_write_eigenpoint(), main(), and mesh::ParallelTetMesh::set_point_ownership().

void mesh::TetMesh::setBoundaryOnFace ( id_t face )

Updates the boundary info of the face and asociated edges and nodes to reflect the fact that the face is on the boundary.

Parameters:

face

face located at the boundary

Definition at line 202 of file tetmesh.cpp.

References mesh::Face::get_corner_id(), get_edge(), get_face(), get_point(), lookupEdge(), and mesh::Entity::set_boundary().

Referenced by TetMeshBuilder::set_bc().

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void mesh::TetMesh::setSymmetryPlaneOnFace	(	id_t	face,
		int	symId
	)

Updates the boundary info of the face and asociated edges and nodes to reflect the fact that the face is on symmetry plane symId.

Parameters:

	face	face located on symmetry plane symId
	symId	id of the symmetry plane with 0 <= symId < 3.

Definition at line 217 of file tetmesh.cpp.

References mesh::Face::get_corner_id(), get_edge(), get_face(), get_point(), lookupEdge(), and mesh::Entity::set_symmetry_plane().

Referenced by TetMeshBuilder::set_bc().

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surface_iterator mesh::TetMesh::surface_begin ( ) [inline]

Return surface_iterator pointing to first surface.

Definition at line 306 of file tetmesh.h.

References face_begin(), face_end(), and mesh::TetMesh::surface_iterator::search().

Referenced by h5_compute_eigenquality(), and NedelecMesh::q_factor().

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surface_iterator mesh::TetMesh::surface_end ( ) [inline]

Return surface_iterator pointing beyond last surface.

Definition at line 313 of file tetmesh.h.

References face_end().

Referenced by h5_compute_eigenquality(), and NedelecMesh::q_factor().

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tet_iterator mesh::TetMesh::tet_begin ( ) [inline]

Return tet_iterator pointing to first Tet

Definition at line 274 of file tetmesh.h.

References _tets.

Referenced by NedelecMesh::assembleAM(), construct_octree(), mesh::ParallelTetMesh::fix_edge_orientation(), generateEdges(), generateFaces(), h5_write_eigenfield(), and h5_write_eigenmesh().

tet_iterator mesh::TetMesh::tet_end ( ) [inline]

Return tet_iterator pointing beyond last Tet

Definition at line 278 of file tetmesh.h.

References _tets.

Referenced by NedelecMesh::assembleAM(), construct_octree(), mesh::ParallelTetMesh::fix_edge_orientation(), generateEdges(), generateFaces(), h5_write_eigenfield(), and h5_write_eigenmesh().

EdgeMap mesh::TetMesh::_edgeMap [private]

Definition at line 358 of file tetmesh.h.

Referenced by finalize_mesh(), insertEdge(), and lookupEdge().

std::vector<Edge> mesh::TetMesh::_edges [private]

Vector of Edge objects.

Definition at line 353 of file tetmesh.h.

Referenced by edge_begin(), edge_end(), get_edge(), and insertEdge().

FaceMap mesh::TetMesh::_faceMap [private]

Definition at line 359 of file tetmesh.h.

Referenced by finalize_mesh(), insertFace(), and lookupFace().

std::vector<Face> mesh::TetMesh::_faces [private]

Vector of Face objects.

Definition at line 349 of file tetmesh.h.

Referenced by face_begin(), face_end(), get_face(), and insertFace().

Materials* mesh::TetMesh::_materials [private]

Definition at line 338 of file tetmesh.h.

Referenced by get_materials(), and load_materials().

id_t mesh::TetMesh::_nofEdge [private]

Definition at line 335 of file tetmesh.h.

Referenced by get_nof_edges(), insertEdge(), and log_mesh_info().

id_t mesh::TetMesh::_nofFace [private]

Definition at line 336 of file tetmesh.h.

Referenced by get_nof_faces(), insertFace(), and log_mesh_info().

id_t mesh::TetMesh::_nofPoint [private]

Definition at line 334 of file tetmesh.h.

Referenced by get_nof_points(), initPoint(), and log_mesh_info().

int mesh::TetMesh::_nofSym [private]

Definition at line 340 of file tetmesh.h.

Referenced by finalize_mesh(), and log_mesh_info().

id_t mesh::TetMesh::_nofTet [private]

Definition at line 333 of file tetmesh.h.

Referenced by get_nof_tets(), initTet(), and log_mesh_info().

LooseOctree<Tet>* mesh::TetMesh::_octree [private]

Definition at line 360 of file tetmesh.h.

Referenced by construct_octree(), get_octree(), and ~TetMesh().

std::vector<Point> mesh::TetMesh::_points [private]

Vector of Point objects.

Definition at line 357 of file tetmesh.h.

Referenced by get_point(), initPoint(), insertPoint(), point_begin(), and point_end().

id_t mesh::TetMesh::_tetCounter [private]

Definition at line 341 of file tetmesh.h.

Referenced by insertTet().

std::vector<Tet> mesh::TetMesh::_tets [private]

Vector of Tet objects.

Definition at line 345 of file tetmesh.h.

Referenced by get_tet(), initTet(), insertTet(), tet_begin(), and tet_end().

TetMesh * mesh::TetMesh::instance_ = 0 [static, private]

Pointer to single TetMesh instance (Singleton)

Definition at line 364 of file tetmesh.h.

Referenced by get_instance(), TetMesh(), and ~TetMesh().


Public Types
typedef std::vector< Tet >::iterator	tet_iterator
typedef std::vector< Face >::iterator	face_iterator
typedef std::vector< Edge >::iterator	edge_iterator
typedef std::vector< Point >::iterator	point_iterator
Public Member Functions
	TetMesh ()
virtual	~TetMesh ()
virtual void	initPoint (int nofPoint)
virtual void	insertPoint (int id, double x, double y, double z)
virtual void	initTet (int nofTet)
virtual void	insertTet (id_t global_id, id_t id0, id_t id1, id_t id2, id_t id3, id_t material)
void	setBoundaryOnFace (id_t face)
void	setSymmetryPlaneOnFace (id_t face, int symId)
void	generateEdges ()
void	generateFaces ()
void	load_materials (const char *fileName)
Materials *	get_materials () const
Tet *	get_tet (id_t id) const
Face *	get_face (id_t id) const
Edge *	get_edge (id_t id) const
Point *	get_point (id_t id) const
const id_t &	get_nof_tets () const
const id_t &	get_nof_faces () const
const id_t &	get_nof_edges () const
const id_t &	get_nof_points () const
LooseOctree< Tet > *	get_octree () const
void	get_bounding_box (Vector3 &center, Vector3 &extent) const
id_t	insertEdge (id_t node0, id_t node1)
id_t	insertFace (id_t tet, id_t node0, id_t node1, id_t node2)
virtual id_t	lookupEdge (id_t node0, id_t node1)
virtual id_t	lookupFace (id_t node0, id_t node1, id_t node2)
virtual void	finalize_mesh (int nofSym)
void	log_mesh_info ()
void	construct_octree ()
bool	is_inside (const Vector3 &p) const
void	find_tets_by_point (const Vector3 &p, std::vector< Tet * > &tets) const
template<typename CurveType>
double	find_boundary (const CurveType &curve, double x_in, double x_out) const
tet_iterator	tet_begin ()
tet_iterator	tet_end ()
face_iterator	face_begin ()
face_iterator	face_end ()
edge_iterator	edge_begin ()
edge_iterator	edge_end ()
point_iterator	point_begin ()
point_iterator	point_end ()
surface_iterator	surface_begin ()
surface_iterator	surface_end ()
Static Public Member Functions
static TetMesh *	get_instance ()
Protected Member Functions
void	dump_face_map (std::ostream &os)
Private Types
typedef std::pair< id_t, id_t >	EdgeMapKey
typedef utility::triple< id_t, id_t, id_t >	FaceMapKey
typedef std::map< EdgeMapKey, id_t >	EdgeMap
typedef std::map< FaceMapKey, id_t >	FaceMap
Private Member Functions
	TetMesh (const TetMesh &)
TetMesh &	operator= (const TetMesh &)
Private Attributes
id_t	_nofTet
id_t	_nofPoint
id_t	_nofEdge
id_t	_nofFace
Materials *	_materials
int	_nofSym
id_t	_tetCounter
std::vector< Tet >	_tets
std::vector< Face >	_faces
std::vector< Edge >	_edges
std::vector< Point >	_points
EdgeMap	_edgeMap
FaceMap	_faceMap
LooseOctree< Tet > *	_octree
Static Private Attributes
static TetMesh *	instance_ = 0
Classes
class	surface_iterator

mesh::TetMesh Class Reference

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Private Types

Private Member Functions

Private Attributes

Static Private Attributes

Classes

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation