opal package
Subpackages
- opal.analysis package
- Notebooks
- opal.analysis.FieldAnalysis module
- opal.analysis.H5Statistics module
H5StatisticsH5Statistics._halo_2d_ellipsoidal_beam()H5Statistics._select()H5Statistics._selectBunch()H5Statistics.find_beams()H5Statistics.gaussian_kde()H5Statistics.halo_2d_ellipsoidal_beam()H5Statistics.halo_continuous_beam()H5Statistics.halo_ellipsoidal_beam()H5Statistics.histogram()H5Statistics.kurtosis()H5Statistics.mean()H5Statistics.moment()H5Statistics.projected_emittance()H5Statistics.radial_halo_2d_ellipsoidal_beam()H5Statistics.radial_halo_ellipsoidal_beam()H5Statistics.radial_moment()H5Statistics.radial_projected_emittance()H5Statistics.rotate()H5Statistics.selectData()H5Statistics.skew()
- opal.analysis.OptimizerAnalysis module
- opal.analysis.SamplerStatistics module
- opal.analysis.Statistics module
- opal.analysis.StdOpalOutputAnalysis module
- opal.analysis.TrackOrbitAnalysis module
- opal.analysis.cyclotron module
- opal.analysis.pareto_fronts module
- opal.datasets package
- Notebooks
- opal.datasets.AmrDataset module
- opal.datasets.DatasetBase module
- opal.datasets.FieldDataset module
FieldDatasetFieldDataset._basenameFieldDataset._directoryFieldDataset._dfFieldDataset._dimFieldDataset._fieldsFieldDataset._loaded_stepFieldDataset._label_mapperFieldDataset._npaddingFieldDataset._parserFieldDataset._strideFieldDataset._unitsFieldDataset.__init__()FieldDataset._count_files()FieldDataset._find_nearest()FieldDataset._get_combined_filename()FieldDataset._load_step()FieldDataset._zero_padding()FieldDataset.dataframeFieldDataset.getData()FieldDataset.getLabel()FieldDataset.getSlice()FieldDataset.getUnit()FieldDataset.get_mesh_spacing()FieldDataset.indicesFieldDataset.namesFieldDataset.positionsFieldDataset.stride
- opal.datasets.GridDataset module
- opal.datasets.H5Dataset module
H5DatasetH5Dataset.__parserH5Dataset.__variable_mapperH5Dataset.__label_mapperH5Dataset.__unit_label_mapperH5Dataset.__directionH5Dataset.__init__()H5Dataset.getData()H5Dataset.getH5DataFrame()H5Dataset.getLabel()H5Dataset.getMonitorDataFrame()H5Dataset.getUnit()H5Dataset.isStepDataset()H5Dataset.size
- opal.datasets.LBalDataset module
- opal.datasets.LossDataset module
- opal.datasets.MemoryDataset module
- opal.datasets.OptimizerDataset module
OptimizerDatasetOptimizerDataset.__parserOptimizerDataset.__postfixOptimizerDataset._loaded_generationOptimizerDataset._loaded_optimizerOptimizerDataset._loadedGenerationOptimizerDataset.__init__()OptimizerDataset._loadGeneration()OptimizerDataset.boundsOptimizerDataset.design_variablesOptimizerDataset.getData()OptimizerDataset.getGenerationBasename()OptimizerDataset.getLabel()OptimizerDataset.getUnit()OptimizerDataset.individuals()OptimizerDataset.num_generationsOptimizerDataset.num_optimizersOptimizerDataset.objectivesOptimizerDataset.size
- opal.datasets.PeakDataset module
- opal.datasets.ProbeHistDataset module
- opal.datasets.SDDSDatasetBase module
SDDSDatasetBaseSDDSDatasetBase._parserSDDSDatasetBase._variable_mapperSDDSDatasetBase._label_mapperSDDSDatasetBase._unit_label_mapperSDDSDatasetBase.__init__()SDDSDatasetBase.dataframeSDDSDatasetBase.getData()SDDSDatasetBase.getLabel()SDDSDatasetBase.getRow()SDDSDatasetBase.getUnit()SDDSDatasetBase.getVariables()SDDSDatasetBase.size
- opal.datasets.SamplerDataset module
SamplerDatasetSamplerDataset.__parserSamplerDataset.__nFilesSamplerDataset.__actual_file_load()SamplerDataset.__init__()SamplerDataset.__load_file()SamplerDataset.boundsSamplerDataset.design_variablesSamplerDataset.getData()SamplerDataset.getLabel()SamplerDataset.getUnit()SamplerDataset.loaded_fileSamplerDataset.objectivesSamplerDataset.size
- opal.datasets.SolverDataset module
- opal.datasets.StatDataset module
- opal.datasets.StdOpalOutputDataset module
- opal.datasets.TimeDataset module
- opal.datasets.TrackOrbitDataset module
- opal.datasets.filetype module
FileTypeFileType.AMRFileType.FIELDFileType.GRIDFileType.H5FileType.HISTFileType.LBALFileType.LOSSFileType.MEMFileType.NONEFileType.OPTIMIZERFileType.OUTPUTFileType.PEAKFileType.SAMPLERFileType.SMBFileType.SOLVERFileType.STATFileType.TIMINGFileType.TRACK_ORBITFileType.checkFileType()FileType.extensionToFileType()FileType.get_extensions()FileType.get_parsers()
- opal.parser package
- Notebooks
- opal.parser.FieldParser module
FieldParserFieldParser._columnsFieldParser._dfFieldParser._dimFieldParser._strideFieldParser.__init__()FieldParser._check_header()FieldParser._parse_header()FieldParser.clear()FieldParser.dataframeFieldParser.dimensionFieldParser.fieldFieldParser.get_unit_dictionary()FieldParser.imageFieldParser.indicesFieldParser.is_scalar()FieldParser.parse()FieldParser.positionsFieldParser.stride
- opal.parser.H5Error module
- opal.parser.H5Parser module
- opal.parser.HistogramParser module
- opal.parser.LatticeParser module
- opal.parser.LossParser module
- opal.parser.OptimizerParser module
OptimizerParserOptimizerParser.__idsOptimizerParser.__dvar_valuesOptimizerParser.__obj_valuesOptimizerParser.__obj_namesOptimizerParser.__dvar_namesOptimizerParser.__paretoOptimizerParser.__actual_parse()OptimizerParser.__clear_container()OptimizerParser.__hasLoaded()OptimizerParser.__init__()OptimizerParser.__parse_version_2_0_0()OptimizerParser.__parse_version_2_1_0()OptimizerParser.__reset_attributes()OptimizerParser.check_file()OptimizerParser.clear()OptimizerParser.getAllInput()OptimizerParser.getAllOutput()OptimizerParser.getBounds()OptimizerParser.getConstraints()OptimizerParser.getDesignVariables()OptimizerParser.getIDs()OptimizerParser.getIndexOfID()OptimizerParser.getIndividual()OptimizerParser.getIndividualWithID()OptimizerParser.getNumOfGenerations()OptimizerParser.getObjectives()OptimizerParser.num_optimizersOptimizerParser.parse()OptimizerParser.readGeneration()
- opal.parser.PeakParser module
- opal.parser.SDDSParser module
SDDSParserSDDSParser.__removeNumber()SDDSParser._checkVersion()SDDSParser._column()SDDSParser._data()SDDSParser._description()SDDSParser._get_type()SDDSParser._hasVariable()SDDSParser._parameter()SDDSParser._parseHeader1_6()SDDSParser._parseHeader1_9()SDDSParser._version()SDDSParser.clear()SDDSParser.collectStatFileData()SDDSParser.dataframeSDDSParser.getDataOfVariable()SDDSParser.getDescriptionOfVariable()SDDSParser.getUnitOfVariable()SDDSParser.getVariables()SDDSParser.parse()SDDSParser.size
- opal.parser.TimingParser module
TimingParserTimingParser._dataTimingParser.__init__()TimingParser._exportAscii()TimingParser._exportPickle()TimingParser._init_data_structure()TimingParser._load_pkl()TimingParser._order()TimingParser.clear()TimingParser.getProblemSize()TimingParser.getTiming()TimingParser.parse()TimingParser.propertiesTimingParser.read()TimingParser.read_ippl_timing()TimingParser.read_output_file()TimingParser.write()
- opal.parser.TrackOrbitParser module
- opal.parser.sampler module
SamplerParserSamplerParser.__idSamplerParser.__tagSamplerParser.__beginSamplerParser.__endSamplerParser.__dvarsSamplerParser.__dvar_boundsSamplerParser.__objsSamplerParser.__fix_bound_type()SamplerParser.__init__()SamplerParser.__parse_version_2_0_0()SamplerParser.__parse_version_2_1_0()SamplerParser.beginSamplerParser.boundsSamplerParser.clear()SamplerParser.design_variablesSamplerParser.endSamplerParser.getIndividual()SamplerParser.getObjectives()SamplerParser.num_samplesSamplerParser.objectivesSamplerParser.parse()
- opal.utilities package
- opal.visualization package
- Subpackages
- Notebooks
- Load Dataset
- Projection Plot
- Slice Plot
- Line Plot
- Particle Plot
- Overlay Particles onto Fields
- H5Plotter_RingMultiBunch
- ProbePlotter
- ProbePlotter_PeakFile
- OptimizerPlotter
- SamplerPlotter
- StatPlotter_FODO
- StatPlotter_Gantry
- StatPlotter_RingCyclotron
- Load the RingCyclotron.stat file
- Set the plotting style
- Do some plotting …
- Load the RingCyclotron.h5 file
- Do some plotting …
- Do some statistics on data
- Load the RingCyclotron.mem file
- Do some plotting …
- Load the RingCyclotron.lbal file
- Do some plotting …
- Load the RingCyclotron-trackOrbit file
- Do some plotting …
- Load timing.dat file
- Do some plotting …
- opal.visualization.AmrPlotter module
- opal.visualization.BasePlotter module
- opal.visualization.FieldPlotter module
- opal.visualization.GridPlotter module
- opal.visualization.H5Plotter module
- opal.visualization.MemoryPlotter module
- opal.visualization.OptimizerPlotter module
OptimizerPlotterOptimizerPlotter.__find()OptimizerPlotter.__init__()OptimizerPlotter.__natural_sort()OptimizerPlotter.__sort_list()OptimizerPlotter.plot_dvar_evolution()OptimizerPlotter.plot_individual_bounds()OptimizerPlotter.plot_objective_evolution()OptimizerPlotter.plot_objectives()OptimizerPlotter.plot_parallel_coordinates()OptimizerPlotter.plot_pareto_front()
- opal.visualization.PeakPlotter module
- opal.visualization.ProbePlotter module
- opal.visualization.ProfilingPlotter module
- opal.visualization.SamplerPlotter module
- opal.visualization.SolverPlotter module
- opal.visualization.StatPlotter module
- opal.visualization.StdOpalOutputPlotter module
- opal.visualization.TimingPlotter module
- opal.visualization.TrackOrbitPlotter module
- opal.visualization.formatter module
opal.config module
opal.opal module
- opal.opal._append_dataset(datasets, ftype, astype, directory, fname)[source]
Append a dataset to the list.
- Parameters:
- Returns:
True if reading is stopped (i.e. sampler, optimizer and AMR datasets), False otherwise.
- Return type:
bool