OPAL (Object Oriented Parallel Accelerator Library): H5PartWrapperForPC Class Reference

OPAL (Object Oriented Parallel Accelerator Library) 2.2.0

OPAL

#include <H5PartWrapperForPC.h>

Inheritance diagram for H5PartWrapperForPC:

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Collaboration diagram for H5PartWrapperForPC:

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Public Member Functions
	H5PartWrapperForPC (const std::string &fileName, h5_int32_t flags=H5_O_WRONLY)

	H5PartWrapperForPC (const std::string &fileName, int restartStep, std::string sourceFile, h5_int32_t flags=H5_O_RDWR)

virtual	~H5PartWrapperForPC ()

virtual void	readHeader ()

virtual void	readStep (PartBunchBase< double, 3 > *, h5_ssize_t firstParticle, h5_ssize_t lastParticle)

virtual void	writeHeader ()

virtual void	writeStep (PartBunchBase< double, 3 > *, const std::map< std::string, double > &additionalStepAttributes)

virtual bool	predecessorIsSameFlavour () const

bool	getPreviousH5Local () const

double	getReferenceR () const

double	getReferenceT () const

double	getReferenceZ () const

double	getReferencePr () const

double	getReferencePt () const

double	getReferencePz () const

double	getMeanKineticEnergy () const

double	getMeanMomentum () const

double	getAzimuth () const

double	getElevation () const

Public Member Functions inherited from H5PartWrapper
virtual	~H5PartWrapper ()

void	close ()

double	getLastPosition ()

void	storeCavityInformation ()

size_t	getNumParticles () const

Private Member Functions
void	readStepHeader (PartBunchBase< double, 3 > *)

void	readStepData (PartBunchBase< double, 3 > *, h5_ssize_t, h5_ssize_t)

void	writeStepHeader (PartBunchBase< double, 3 > *, const std::map< std::string, double > &)

void	writeStepData (PartBunchBase< double, 3 > *)

Private Attributes
bool	previousH5Local_m

Vector_t	referenceMomentum_m

Vector_t	referenceLocation_m

h5_float64_t	meanE_m

h5_float64_t	meanMomentum_m

h5_float64_t	azimuth_m

h5_float64_t	elevation_m

Additional Inherited Members
Protected Member Functions inherited from H5PartWrapper
	H5PartWrapper (const std::string &fileName, h5_int32_t flags=H5_O_WRONLY)

	H5PartWrapper (const std::string &fileName, int restartStep, std::string sourceFile, h5_int32_t flags=H5_O_RDWR)

void	open (h5_int32_t flags)

void	copyFile (const std::string &sourceFile, int lastStep=-1, h5_int32_t flags=H5_O_WRONLY)

void	copyFileSystem (const std::string &sourceFile)

void	copyHeader (h5_file_t source)

void	copyStep (h5_file_t source, int step)

void	copyStepHeader (h5_file_t source)

void	copyStepData (h5_file_t source)

void	sendFailureMessage (bool failed, const std::string &where, const std::string &what)

void	receiveFailureMessage (int sourceNode, const std::string &where, const std::string &what)

Static Protected Member Functions inherited from H5PartWrapper
static void	reportOnError (h5_int64_t rc, const char *file, int line)

Protected Attributes inherited from H5PartWrapper
h5_file_t	file_m

std::string	fileName_m

std::string	predecessorOPALFlavour_m

h5_int64_t	numSteps_m

bool	startedFromExistingFile_m

Static Protected Attributes inherited from H5PartWrapper
static std::string	copyFilePrefix_m = ".copy"

Detailed Description

H5PartWrapperForPC: a class that manages calls to H5Part for the cyclotron tracker

Definition at line 15 of file H5PartWrapperForPC.h.

Constructor & Destructor Documentation

H5PartWrapperForPC::H5PartWrapperForPC	(	const std::string &	fileName,
		h5_int32_t	flags = `H5_O_WRONLY`
	)

Definition at line 19 of file H5PartWrapperForPC.cpp.

H5PartWrapperForPC::H5PartWrapperForPC	(	const std::string &	fileName,
		int	restartStep,
		std::string	sourceFile,
		h5_int32_t	flags = `H5_O_RDWR`
	)

Definition at line 30 of file H5PartWrapperForPC.cpp.

H5PartWrapperForPC::~H5PartWrapperForPC ( )

virtual

Definition at line 44 of file H5PartWrapperForPC.cpp.

Member Function Documentation

double H5PartWrapperForPC::getAzimuth ( ) const

inline

Definition at line 107 of file H5PartWrapperForPC.h.

References azimuth_m.

Referenced by TrackRun::setupCyclotronTracker().

double H5PartWrapperForPC::getElevation ( ) const

inline

Definition at line 112 of file H5PartWrapperForPC.h.

References elevation_m.

Referenced by TrackRun::setupCyclotronTracker().

double H5PartWrapperForPC::getMeanKineticEnergy ( ) const

inline

Definition at line 97 of file H5PartWrapperForPC.h.

References meanE_m.

double H5PartWrapperForPC::getMeanMomentum ( ) const

inline

Definition at line 102 of file H5PartWrapperForPC.h.

References meanMomentum_m.

Referenced by TrackRun::setupCyclotronTracker().

bool H5PartWrapperForPC::getPreviousH5Local ( ) const

inline

Definition at line 62 of file H5PartWrapperForPC.h.

References previousH5Local_m.

Referenced by TrackRun::setupCyclotronTracker().

double H5PartWrapperForPC::getReferencePr ( ) const

inline

Definition at line 82 of file H5PartWrapperForPC.h.

References referenceMomentum_m.

Referenced by TrackRun::setupCyclotronTracker().

double H5PartWrapperForPC::getReferencePt ( ) const

inline

Definition at line 87 of file H5PartWrapperForPC.h.

References referenceMomentum_m.

Referenced by TrackRun::setupCyclotronTracker().

double H5PartWrapperForPC::getReferencePz ( ) const

inline

Definition at line 92 of file H5PartWrapperForPC.h.

References referenceMomentum_m.

Referenced by TrackRun::setupCyclotronTracker().

double H5PartWrapperForPC::getReferenceR ( ) const

inline

Definition at line 67 of file H5PartWrapperForPC.h.

References referenceLocation_m.

Referenced by TrackRun::setupCyclotronTracker().

double H5PartWrapperForPC::getReferenceT ( ) const

inline

Definition at line 72 of file H5PartWrapperForPC.h.

References referenceLocation_m.

Referenced by TrackRun::setupCyclotronTracker().

double H5PartWrapperForPC::getReferenceZ ( ) const

inline

Definition at line 77 of file H5PartWrapperForPC.h.

References referenceLocation_m.

Referenced by TrackRun::setupCyclotronTracker().

bool H5PartWrapperForPC::predecessorIsSameFlavour ( ) const

inlinevirtual

Implements H5PartWrapper.

Definition at line 57 of file H5PartWrapperForPC.h.

References H5PartWrapper::predecessorOPALFlavour_m.

void H5PartWrapperForPC::readHeader ( )

virtual

Implements H5PartWrapper.

Definition at line 47 of file H5PartWrapperForPC.cpp.

References H5PartWrapper::file_m, OpalData::getInstance(), READFILEATTRIB, REPORTONERROR, and OpalData::setRestartDumpFreq().

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void H5PartWrapperForPC::readStep	(	PartBunchBase< double, 3 > *	bunch,
		h5_ssize_t	firstParticle,
		h5_ssize_t	lastParticle
	)

virtual

Implements H5PartWrapper.

Definition at line 74 of file H5PartWrapperForPC.cpp.

References H5PartWrapper::file_m, readStepData(), readStepHeader(), and REPORTONERROR.

Referenced by MultiBunchHandler::readBunch().

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void H5PartWrapperForPC::readStepData	(	PartBunchBase< double, 3 > *	bunch,
		h5_ssize_t	firstParticle,
		h5_ssize_t	lastParticle
	)

private

Definition at line 149 of file H5PartWrapperForPC.cpp.

References PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::bunchNum, H5PartWrapper::file_m, PartBunchBase< T, Dim >::getNumBunch(), H5PartWrapper::getNumParticles(), PartBunchBase< T, Dim >::M, Hypervolume::n, PartBunchBase< T, Dim >::P, H5PartWrapper::predecessorOPALFlavour_m, PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::R, READDATA, and REPORTONERROR.

Referenced by readStep().

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void H5PartWrapperForPC::readStepHeader ( PartBunchBase< double, 3 > * bunch )

private

Definition at line 86 of file H5PartWrapperForPC.cpp.

References azimuth_m, Physics::e, elevation_m, endl(), ERRORMSG, H5PartWrapper::file_m, PartBunchBase< T, Dim >::getM(), meanE_m, meanMomentum_m, pow(), H5PartWrapper::predecessorOPALFlavour_m, previousH5Local_m, READSTEPATTRIB, referenceLocation_m, referenceMomentum_m, PartBunchBase< T, Dim >::set_sPos(), PartBunchBase< T, Dim >::setGlobalTrackStep(), PartBunchBase< T, Dim >::setLocalTrackStep(), PartBunchBase< T, Dim >::setNumBunch(), PartBunchBase< T, Dim >::setSteptoLastInj(), PartBunchBase< T, Dim >::setT(), and sqrt().

Referenced by readStep().

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void H5PartWrapperForPC::writeHeader ( )

virtual

Write file dump frequency.

Implements H5PartWrapper.

Definition at line 228 of file H5PartWrapperForPC.cpp.

References Options::ebDump, H5PartWrapper::file_m, Util::getGitRevision(), OPAL_PROJECT_NAME, OPAL_PROJECT_VERSION, Options::psDumpFreq, WRITEFILEATTRIB, and WRITESTRINGFILEATTRIB.

Referenced by MultiBunchHandler::saveBunch().

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void H5PartWrapperForPC::writeStep	(	PartBunchBase< double, 3 > *	bunch,
		const std::map< std::string, double > &	additionalStepAttributes
	)

virtual

Implements H5PartWrapper.

Definition at line 314 of file H5PartWrapperForPC.cpp.

References H5PartWrapper::close(), PartBunchBase< T, Dim >::getTotalNum(), H5PartWrapper::numSteps_m, H5PartWrapper::open(), writeStepData(), and writeStepHeader().

Referenced by MultiBunchHandler::saveBunch().

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void H5PartWrapperForPC::writeStepData ( PartBunchBase< double, 3 > * bunch )

private

Write space charge field map if asked for.

Need this to align particles and fields when writing space charge map.

Definition at line 467 of file H5PartWrapperForPC.cpp.

References PartBunchBase< T, Dim >::Bf, PartBunchBase< T, Dim >::Bin, PartBunchBase< T, Dim >::bunchNum, Options::ebDump, PartBunchBase< T, Dim >::Ef, H5PartWrapper::file_m, PartBunchBase< T, Dim >::get_hr(), PartBunchBase< T, Dim >::get_origin(), PartBunchBase< T, Dim >::getFieldLayout(), FieldLayout< Dim >::getLocalNDIndex(), PartBunchBase< T, Dim >::getLocalNum(), PartBunchBase< T, Dim >::getRho(), PartBunchBase< T, Dim >::hasBinning(), PartBunchBase< T, Dim >::ID, PartBunchBase< T, Dim >::M, max(), min(), PartBunchBase< T, Dim >::P, PartBunchBase< T, Dim >::Q, PartBunchBase< T, Dim >::R, REPORTONERROR, Options::rhoDump, and WRITEDATA.

Referenced by writeStep().

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void H5PartWrapperForPC::writeStepHeader	(	PartBunchBase< double, 3 > *	bunch,
		const std::map< std::string, double > &	additionalStepAttributes
	)

private

Write particle mass and charge per particle. (Consider making these file attributes.)

Definition at line 327 of file H5PartWrapperForPC.cpp.

References Physics::c, PartBunchBase< T, Dim >::calcBeamParameters(), endl(), Physics::epsilon_0, ERRORMSG, H5PartWrapper::file_m, PartBunchBase< T, Dim >::get_centroid(), PartBunchBase< T, Dim >::get_emit(), PartBunchBase< T, Dim >::get_gamma(), PartBunchBase< T, Dim >::get_maxExtent(), PartBunchBase< T, Dim >::get_meanKineticEnergy(), PartBunchBase< T, Dim >::get_norm_emit(), PartBunchBase< T, Dim >::get_origin(), PartBunchBase< T, Dim >::get_PBounds(), PartBunchBase< T, Dim >::get_pmean(), PartBunchBase< T, Dim >::get_prms(), PartBunchBase< T, Dim >::get_rmean(), PartBunchBase< T, Dim >::get_rrms(), PartBunchBase< T, Dim >::get_sPos(), PartBunchBase< T, Dim >::getCharge(), PartBunchBase< T, Dim >::getdE(), PartBunchBase< T, Dim >::getGlobalTrackStep(), PartBunchBase< T, Dim >::getLocalTrackStep(), PartBunchBase< T, Dim >::getM(), PartBunchBase< T, Dim >::getNumBunch(), PartBunchBase< T, Dim >::getQ(), PartBunchBase< T, Dim >::getSteptoLastInj(), PartBunchBase< T, Dim >::getT(), Options::GLOBAL, H5PartWrapper::numSteps_m, Physics::pi, Options::psDumpFrame, PartBunchBase< T, Dim >::RefPartP_m, PartBunchBase< T, Dim >::RefPartR_m, REPORTONERROR, WRITESTEPATTRIB, and WRITESTRINGSTEPATTRIB.

Referenced by writeStep().

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Member Data Documentation

h5_float64_t H5PartWrapperForPC::azimuth_m

private

Definition at line 52 of file H5PartWrapperForPC.h.

Referenced by getAzimuth(), and readStepHeader().

h5_float64_t H5PartWrapperForPC::elevation_m

private

Definition at line 53 of file H5PartWrapperForPC.h.

Referenced by getElevation(), and readStepHeader().

h5_float64_t H5PartWrapperForPC::meanE_m

private

Definition at line 50 of file H5PartWrapperForPC.h.

Referenced by getMeanKineticEnergy(), and readStepHeader().

h5_float64_t H5PartWrapperForPC::meanMomentum_m

private

Definition at line 51 of file H5PartWrapperForPC.h.

Referenced by getMeanMomentum(), and readStepHeader().

bool H5PartWrapperForPC::previousH5Local_m

private

Definition at line 47 of file H5PartWrapperForPC.h.

Referenced by getPreviousH5Local(), and readStepHeader().

Vector_t H5PartWrapperForPC::referenceLocation_m

private

Definition at line 49 of file H5PartWrapperForPC.h.

Referenced by getReferenceR(), getReferenceT(), getReferenceZ(), and readStepHeader().

Vector_t H5PartWrapperForPC::referenceMomentum_m

private

Definition at line 48 of file H5PartWrapperForPC.h.

Referenced by getReferencePr(), getReferencePt(), getReferencePz(), and readStepHeader().

The documentation for this class was generated from the following files:

src/Structure/H5PartWrapperForPC.h
src/Structure/H5PartWrapperForPC.cpp